RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 GNA13Q14344 377 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 TRMT5Q32P41 509 aaKnown RBP11.75□□□□□ -0.53
COL6A6-203ENST00000511332 MMEL1Q495T6 779 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 CMPK2Q5EBM0 449 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 COX20Q5RI15 118 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 GFRALQ6UXV0 394 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 MTDHQ86UE4 582 aaKnown RBP11.75□□□□□ -0.53
COL6A6-203ENST00000511332 SNX32Q86XE0 403 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 MISPQ8IVT2 679 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 GHDCQ8N2G8 530 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 TMEM251Q8N6I4 163 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 PCYOX1LQ8NBM8 494 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 ROPN1LQ96C74 230 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 SLC25A37Q9NYZ2 338 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 CALML5Q9NZT1 146 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 FLRT3Q9NZU0 649 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 VAPAQ9P0L0 249 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 ADAM21Q9UKJ8 722 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 GMEB1Q9Y692 573 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 ANKUB1A6NFN9 424 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 H3BNH8 94 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 J3QKU1 62 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 GNB5O14775 395 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 MRASO14807 208 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 NDUFB5O43674 189 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 KIAA0513O60268 411 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 DCTN3O75935 186 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 UNC5CO95185 931 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 NPPAP01160 153 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 ETFAP13804 333 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 ENDOUP21128 410 aaKnown RBP11.74□□□□□ -0.53
COL6A6-203ENST00000511332 MVDP53602 400 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 GAS1P54826 345 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 C17orf67Q0P5P2 114 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 FUT5Q11128 374 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 CYLC2Q14093 348 aaPredicted RBP11.74□□□□□ -0.53
COL6A6-203ENST00000511332 GANABQ14697 944 aaKnown RBP11.74□□□□□ -0.53
COL6A6-203ENST00000511332 RGNQ15493 299 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 IGFBP7Q16270 282 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 GPAT3Q53EU6 434 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 GKAP1Q5VSY0 366 aaPredicted RBP11.74□□□□□ -0.53
COL6A6-203ENST00000511332 FNDC7Q5VTL7 733 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 REP15Q6BDI9 236 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 PIGWQ7Z7B1 504 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 ZAR1Q86SH2 424 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 PLCZ1Q86YW0 608 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 MSRB3Q8IXL7 192 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 OR4K17Q8NGC6 315 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 OR4C3Q8NH37 302 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 RP9Q8TA86 221 aaKnown RBP11.74□□□□□ -0.53
COL6A6-203ENST00000511332 TRNT1Q96Q11 434 aaKnown RBP11.74□□□□□ -0.53
COL6A6-203ENST00000511332 UBQLN3Q9H347 655 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 FBXO34Q9NWN3 711 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 SLAMF8Q9P0V8 285 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 WDR45Q9Y484 360 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF407Q9C0G0 2248 aa11.74□□□□□ -0.53
COL6A6-203ENST00000511332 NPIPB9F8W1W9 429 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 FBP2O00757 339 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CDC40O60508 579 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL6A6-203ENST00000511332 DNAJC13O75165 2243 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CBR3O75828 277 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 H6PDO95479 791 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CBX6O95503 412 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 ANGPTL1O95841 491 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 IGHG3P01860 377 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 C1QCP02747 245 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 RFPL3SP0C7P2 107 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 NR2F1P10589 423 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 BMP2P12643 396 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CD1EP15812 388 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 GCKP35557 465 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CRISP3P54108 245 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 ATP12AP54707 1039 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 GTF3C1Q12789 2109 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 SLC10A1Q14973 349 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 TOMM20Q15388 145 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 GPR68Q15743 365 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 ARHGAP11AQ6P4F7 1023 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 DLEU7Q6UYE1 221 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 MTERF4Q7Z6M4 381 aaKnown RBP11.73□□□□□ -0.53
COL6A6-203ENST00000511332 MARCH3Q86UD3 253 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF619Q8N2I2 560 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF614Q8N883 585 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 PMM1Q92871 262 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 GNRHR2Q96P88 292 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CCT8L2Q96SF2 557 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CGREF1Q99674 301 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CPPED1Q9BRF8 314 aaPredicted RBP11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CCDC106Q9BWC9 280 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 MYLK2Q9H1R3 596 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 PTGES2Q9H7Z7 377 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 CACYBPQ9HB71 228 aaKnown RBP11.73□□□□□ -0.53
COL6A6-203ENST00000511332 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 GID8Q9NWU2 228 aa11.73□□□□□ -0.53
COL6A6-203ENST00000511332 IGLV3-32A0A0A0MS00 114 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 NPIPA5A0A0B4J1W7 369 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 NPIPA7E9PJI5 369 aa11.72□□□□□ -0.53
COL6A6-203ENST00000511332 SUSD5O60279 629 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms