RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 KCNJ11Q14654 390 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 CYBRD1Q53TN4 286 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 NEK5Q6P3R8 708 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 OLFM4Q6UX06 510 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 SCARA5Q6ZMJ2 495 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 TRPM8Q7Z2W7 1104 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 MIER3Q7Z3K6 550 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 ELMOD2Q8IZ81 293 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 CADM2Q8N3J6 435 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 BPIFB2Q8N4F0 458 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 RNF148Q8N7C7 305 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 OR56B1Q8NGI3 324 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 TMEM80Q96HE8 168 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 SPXQ9BT56 116 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 WRAP53Q9BUR4 548 aaKnown RBP2.61□□□□□ -1.99
CHD1-203ENST00000505657 CCSER1Q9C0I3 900 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 TRPV5Q9NQA5 729 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 UTP6Q9NYH9 597 aaKnown RBP2.61□□□□□ -1.99
CHD1-203ENST00000505657 ZNF221Q9UK13 617 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 USP16Q9Y5T5 823 aa2.61□□□□□ -1.99
CHD1-203ENST00000505657 WI2-2373I1.2A0A1W2PRP0 233 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 E9PLD3 99 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 PDXKO00764 312 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 CASKO14936 926 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 B3GALNT1O75752 331 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 ACTL6AO96019 429 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 MT-ATP6P00846 226 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 TGFAP01135 160 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 CD55P08174 381 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 ANXA4P09525 319 aaPredicted RBP2.6□□□□□ -1.99
CHD1-203ENST00000505657 ETS1P14921 441 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 XRCC1P18887 633 aaPredicted RBP2.6□□□□□ -1.99
CHD1-203ENST00000505657 STARP49675 285 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 STARD6P59095 220 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 RPL32P62910 135 aaKnown RBP2.6□□□□□ -1.99
CHD1-203ENST00000505657 RPL8P62917 257 aaKnown RBP2.6□□□□□ -1.99
CHD1-203ENST00000505657 GABPB1Q06547 395 aaPredicted RBP2.6□□□□□ -1.99
CHD1-203ENST00000505657 BCL2L1Q07817 233 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 KARSQ15046 597 aaKnown RBP2.6□□□□□ -1.99
CHD1-203ENST00000505657 CDKN3Q16667 212 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 SPATA46Q5T0L3 261 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 ZNF530Q6P9A1 599 aaPredicted RBP2.6□□□□□ -1.99
CHD1-203ENST00000505657 OR2T33Q8NG76 320 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 OR10H4Q8NGA5 316 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 NCLNQ969V3 563 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 TBC1D31Q96DN5 1066 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 IMMP1LQ96LU5 166 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 C1orf123Q9NWV4 160 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 NINJ2Q9NZG7 142 aa2.6□□□□□ -1.99
CHD1-203ENST00000505657 LRRC30A6NM36 301 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 H3BTX0 84 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 K7ENP7 123 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 LGALS8O00214 317 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 APBB3O95704 486 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 GSTT2P0CG29 244 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 GSTT2BP0CG30 244 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 CCDC192P0DO97 292 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 MGMTP16455 207 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 EXOSC2Q13868 293 aaKnown RBP2.59□□□□□ -1.99
CHD1-203ENST00000505657 CAPRIN1Q14444 709 aaKnown RBP2.59□□□□□ -1.99
CHD1-203ENST00000505657 HERPUD1Q15011 391 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 KYAT1Q16773 422 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 OR2B11Q5JQS5 317 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 IGFL2Q6UWQ7 119 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 TFAP2EQ6VUC0 442 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 CYS1Q717R9 158 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 OR9A4Q8NGU2 314 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 RSPH1Q8WYR4 309 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 HAVCR1Q96D42 359 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 SAMD8Q96LT4 415 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 NMNAT2Q9BZQ4 307 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 KRT23Q9C075 422 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 C1orf21Q9H246 121 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 ASB8Q9H765 288 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 ROPN1Q9HAT0 212 aaPredicted RBP2.59□□□□□ -1.99
CHD1-203ENST00000505657 SOHLH2Q9NX45 425 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 ADAM22Q9P0K1 906 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 SPRR3Q9UBC9 169 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 RPS6KB2Q9UBS0 482 aa2.59□□□□□ -1.99
CHD1-203ENST00000505657 ABCC4O15439 1325 aa2.59□□□□□ -2
CHD1-203ENST00000505657 UBE4BO95155 1302 aa2.59□□□□□ -2
CHD1-203ENST00000505657 RNF103-CHMP3A0A140T963 221 aa2.58□□□□□ -2
CHD1-203ENST00000505657 EFNA2O43921 213 aa2.58□□□□□ -2
CHD1-203ENST00000505657 PRPSAP2O60256 369 aa2.58□□□□□ -2
CHD1-203ENST00000505657 GPX5O75715 221 aa2.58□□□□□ -2
CHD1-203ENST00000505657 FUT1P19526 365 aa2.58□□□□□ -2
CHD1-203ENST00000505657 RPA1P27694 616 aa2.58□□□□□ -2
CHD1-203ENST00000505657 RBMXP38159 391 aaKnown RBP2.58□□□□□ -2
CHD1-203ENST00000505657 CD86P42081 329 aa2.58□□□□□ -2
CHD1-203ENST00000505657 NOVA1P51513 510 aaKnown RBP2.58□□□□□ -2
CHD1-203ENST00000505657 ATXN3P54252 364 aaPredicted RBP2.58□□□□□ -2
CHD1-203ENST00000505657 RIPK4P57078 832 aa2.58□□□□□ -2
CHD1-203ENST00000505657 POLR2FP61218 127 aaKnown RBP2.58□□□□□ -2
CHD1-203ENST00000505657 RND3P61587 244 aa2.58□□□□□ -2
CHD1-203ENST00000505657 PSG7Q13046 419 aa2.58□□□□□ -2
CHD1-203ENST00000505657 GAMTQ14353 236 aa2.58□□□□□ -2
CHD1-203ENST00000505657 TEX44Q53QW1 395 aa2.58□□□□□ -2
CHD1-203ENST00000505657 DNAJC21Q5F1R6 531 aaKnown RBP2.58□□□□□ -2
CHD1-203ENST00000505657 PVRIGQ6DKI7 326 aa2.58□□□□□ -2
CHD1-203ENST00000505657 ZCCHC12Q6PEW1 402 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms