RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 YKT6O15498 198 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SNAPC5O75971 98 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 APOL3O95236 402 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 P2RX3P56373 397 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 RAB25P57735 213 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 DEFA5Q01523 94 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 BTN1A1Q13410 526 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 HLA-DQA1Q5Y7H0 255 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 FAM205BPQ63HN1 556 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PODNL1Q6PEZ8 512 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TCEANCQ8N8B7 351 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 BAHD1Q8TBE0 780 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 FAM110BQ8TC76 370 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 FANK1Q8TC84 345 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GPBAR1Q8TDU6 330 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GPR151Q8TDV0 419 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 DNAJA4Q8WW22 397 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TP53INP1Q96A56 240 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 KIAA1143Q96AT1 154 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 DGAT2Q96PD7 388 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GINS4Q9BRT9 223 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 DSN1Q9H410 356 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 FGF20Q9NP95 211 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SIRT3Q9NTG7 399 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MRPS18AQ9NVS2 196 aaKnown RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 VNN3Q9NY84 501 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 EXO1Q9UQ84 846 aaKnown RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 A0A1W2PR48 441 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 UNC119BA6NIH7 251 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 TLX2O43763 284 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 PRAMEF2O60811 474 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ALX3O95076 343 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF888P0CJ79 500 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 CDH11P55287 796 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 WNT4P56705 351 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 HNRNPKP61978 463 aaKnown RBP eCLIP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SEC23BQ15437 767 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 COL13A1Q5TAT6 717 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 CACUL1Q86Y37 369 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SNX29P2Q8IUI4 249 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SPNS2Q8IVW8 549 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SNAPC3Q92966 411 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SLC41A3Q96GZ6 507 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 AHCYL2Q96HN2 611 aaKnown RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 GAS2L1Q99501 681 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 PBX4Q9BYU1 374 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ANKRA2Q9H9E1 313 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 FGF22Q9HCT0 170 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 C11orf16Q9NQ32 467 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 PCDHB16Q9NRJ7 776 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 AKAP7Q9P0M2 348 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 FTSJ1Q9UET6 329 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF443Q9Y2A4 671 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SLC35A3Q9Y2D2 325 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ANKRD12Q6UB98 2062 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 MN1Q10571 1320 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ECDO95905 644 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ATP1B1P05026 303 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 POU2F1P14859 743 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 HK1P19367 917 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 CERS1P27544 350 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 NOS3P29474 1203 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 CD6P30203 668 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 MAP2K4P45985 399 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 MTNR1AP48039 350 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 DUSP7Q16829 419 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SYT16Q17RD7 645 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ALG11Q2TAA5 492 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ARHGAP11AQ6P4F7 1023 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 UBE2J2Q8N2K1 259 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 OR2L13Q8N349 312 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 LINC01555Q8NAE3 123 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 OR9Q2Q8NGE9 314 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 DYNC2LI1Q8TCX1 351 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 OR1E3Q8WZA6 343 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 NEURL2Q9BR09 285 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SLC30A2Q9BRI3 323 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 CHCHD6Q9BRQ6 235 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 MRI1Q9BV20 369 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 MROQ9BYG7 248 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SLC6A15Q9H2J7 730 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SPNS1Q9H2V7 528 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SLC6A20Q9NP91 592 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 TNFRSF10DQ9UBN6 386 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ATG4BQ9Y4P1 393 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 TMEM150CB9EJG8 249 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 POLR1CO15160 346 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 LCMT2O60294 686 aaKnown RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 KDM4BO94953 1096 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 ADORA3P0DMS8 318 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 MYL9P24844 172 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SNRPD2P62316 118 aaKnown RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 GRM7Q14831 915 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 MLF2Q15773 248 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SSX2Q16385 188 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 SYPL1Q16563 259 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 CTF1Q16619 201 aa6.93□□□□□ -1.3
PDGFC-203ENST00000502773 PRPF38BQ5VTL8 546 aaKnown RBP6.93□□□□□ -1.3
PDGFC-203ENST00000502773 HACD4Q5VWC8 232 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms