RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TDRKHQ9Y2W6 561 aaKnown RBP3.93□□□□□ -1.78
VPS52-222ENST00000495981 TESMINQ9Y4I5 508 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.93□□□□□ -1.78
VPS52-222ENST00000495981 ALG6Q9Y672 507 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 MAU2Q9Y6X3 613 aa3.93□□□□□ -1.78
VPS52-222ENST00000495981 A0A1W2PPM1 405 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 CCDC151A5D8V7 595 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 IQCF5A8MTL0 148 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 MAGEB17A8MXT2 336 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 MAP2K7O14733 419 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 KLHL41O60662 606 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 ESRRBO95718 433 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 BCL10O95999 233 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 GOT2P00505 430 aaKnown RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 PLAUP00749 431 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 SERPINA7P05543 415 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 NHLRC4P0CG21 123 aaPredicted RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 ETFAP13804 333 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 FBLP22087 321 aaKnown RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 GRIA1P42261 906 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 OR1D4P47884 311 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 COMPP49747 757 aaPredicted RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 GPR143P51810 404 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 VSX2P58304 361 aaPredicted RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 TPM4P67936 248 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 EEF1A2Q05639 463 aaKnown RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 OASLQ15646 514 aaKnown RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 C3AR1Q16581 482 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 CTSL3PQ5NE16 218 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 ZNF425Q6IV72 752 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 TEX38Q6PEX7 206 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 PET117Q6UWS5 81 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 LINC00696Q6ZRV3 163 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 OTOAQ7RTW8 1153 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 CCDC91Q7Z6B0 441 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 CNGA4Q8IV77 575 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 SIAH3Q8IW03 269 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 RCOR2Q8IZ40 523 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 KRT222Q8N1A0 295 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 C2orf73Q8N5S3 287 aaPredicted RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 RBM15BQ8NDT2 890 aaKnown RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 MDS2Q8NDY4 140 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 CHDHQ8NE62 594 aaPredicted RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 OR52K1Q8NGK4 314 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 OR2A1Q8NGT9 310 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 N4BP2L2Q92802 583 aaPredicted RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 THOC3Q96J01 351 aaKnown RBP3.92□□□□□ -1.78
VPS52-222ENST00000495981 C18orf12Q96KH6 178 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 CCDC42Q96M95 316 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 NPAS2Q99743 824 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 PIMREGQ9BSJ6 248 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 RAB11FIP5Q9BXF6 653 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 FUT8Q9BYC5 575 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 P2RY12Q9H244 342 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 NRIP3Q9NQ35 241 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 TREX1Q9NSU2 369 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 C14orf105Q9NVL8 296 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 SPATA7Q9P0W8 599 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 NDRG3Q9UGV2 375 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 TINAGQ9UJW2 476 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 C3orf18Q9UK00 162 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 ZNF148Q9UQR1 794 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 NFS1Q9Y697 457 aa3.92□□□□□ -1.78
VPS52-222ENST00000495981 TRAV17A0A0B4J275 112 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 HYKKA2RU49 373 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 ASPDHA6ND91 283 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 OR5H15A6NDH6 313 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 CGB1A6NKQ9 187 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 ARHGEF33A8MVX0 844 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 BTNL10A8MVZ5 291 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 IDSB3KWA1 339 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 GOLGA6L19H0YKK7 550 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 CCDC188H7C350 402 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 RTCAO00442 366 aaKnown RBP3.91□□□□□ -1.78
VPS52-222ENST00000495981 SLC19A2O60779 497 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 ZNF189O75820 626 aaPredicted RBP3.91□□□□□ -1.78
VPS52-222ENST00000495981 BMP10O95393 424 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 CLDN14O95500 239 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 C1orf105O95561 183 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 WDPCPO95876 746 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 F10P00742 488 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 HKR1P10072 659 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 DCTDP32321 178 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 SLC26A3P40879 764 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 HCFC1P51610 2035 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 MRPS34P82930 218 aaKnown RBP3.91□□□□□ -1.78
VPS52-222ENST00000495981 PLOD1Q02809 727 aaPredicted RBP3.91□□□□□ -1.78
VPS52-222ENST00000495981 RUNX1T1Q06455 604 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 HSPA14Q0VDF9 509 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 FASTKQ14296 549 aaKnown RBP3.91□□□□□ -1.78
VPS52-222ENST00000495981 PRPSAP1Q14558 356 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 LASP1Q14847 261 aaKnown RBP3.91□□□□□ -1.78
VPS52-222ENST00000495981 MEP1BQ16820 701 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 SYT16Q17RD7 645 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 PARP6Q2NL67 630 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 HKDC1Q2TB90 917 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 ODF2Q5BJF6 829 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 TCTE1Q5JU00 501 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 WASHC2DQ5SRD0 308 aa3.91□□□□□ -1.78
VPS52-222ENST00000495981 TSTD2Q5T7W7 516 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms