RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ATAD3CQ5T2N8 411 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 CLEC14AQ86T13 490 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 IGFN1Q86VF2 1251 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 SYT3Q9BQG1 590 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 TAS2R3Q9NYW6 316 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 GABRR3A8MPY1 467 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 ZBTB42B2RXF5 422 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 RGS19P49795 217 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 TRA2BP62995 288 aaKnown RBP18.08■□□□□ 0.48
COL27A1-207ENST00000494090 DOK4Q8TEW6 326 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 TRMT2BQ96GJ1 504 aaKnown RBP18.08■□□□□ 0.48
COL27A1-207ENST00000494090 CRB3Q9BUF7 120 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 LMAN1LQ9HAT1 526 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 PCDHGA8Q9Y5G5 932 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 CTSL3PQ5NE16 218 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 PGM2L1Q6PCE3 622 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 ALOXE3Q9BYJ1 711 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 SACM1LQ9NTJ5 587 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 F5H0A9 414 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-207ENST00000494090 KIAA0355O15063 1070 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 CDK1P06493 297 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 ALDOCP09972 364 aaKnown RBP18.07■□□□□ 0.48
COL27A1-207ENST00000494090 ATXN1LP0C7T5 689 aaKnown RBP18.07■□□□□ 0.48
COL27A1-207ENST00000494090 DAP3P51398 398 aaKnown RBP18.07■□□□□ 0.48
COL27A1-207ENST00000494090 FAM180BQ6P0A1 224 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 CBLL1Q75N03 491 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 HSD11B1LQ7Z5J1 315 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 ZNF619Q8N2I2 560 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 PPP1R35Q8TAP8 253 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 FAM174AQ8TBP5 190 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 ADAMTS19Q8TE59 1207 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 LYRM1O43325 122 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 SLC26A5P58743 744 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 ZNF691Q5VV52 312 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 KCTD11Q693B1 232 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 TMEM53Q6P2H8 277 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 CHPT1Q8WUD6 406 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 C16orf58Q96GQ5 468 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 MRI1Q9BV20 369 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 DUSP23Q9BVJ7 150 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 TMEM185BQ9H7F4 350 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 PRSS21Q9Y6M0 314 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 ADAMTS4O75173 837 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 MAS1P04201 325 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 CPOXP36551 454 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 ALKAL1Q6UXT8 129 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 B3GNT7Q8NFL0 401 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 KLHL9Q9P2J3 617 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 SLC7A7Q9UM01 511 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 B8ZZF3 427 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 TOXO94900 526 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 PITPNBP48739 271 aa18.07■□□□□ 0.48
COL27A1-207ENST00000494090 SLC25A44Q96H78 314 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-207ENST00000494090 UBE2J1Q9Y385 318 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-207ENST00000494090 CCR7P32248 378 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 MAGEA3P43357 314 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 FASLGP48023 281 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 EEF1A1P5Q5VTE0 462 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 ZNF704Q6ZNC4 412 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-207ENST00000494090 CPOQ8IVL8 374 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 UBXN10Q96LJ8 280 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 CNOT2Q9NZN8 540 aaKnown RBP18.06■□□□□ 0.48
COL27A1-207ENST00000494090 H7C2Y5 167 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 ZNF28P17035 718 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 EMP2P54851 167 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 NTHL1P78549 312 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 TLE3Q04726 772 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 PIWIL3Q7Z3Z3 882 aaKnown RBP18.06■□□□□ 0.48
COL27A1-207ENST00000494090 GTF2H4Q92759 462 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 DPCDQ9BVM2 203 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-207ENST00000494090 ARL6Q9H0F7 186 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 C12orf71A8MTZ7 269 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 TRMT10AQ8TBZ6 339 aaKnown RBP18.06■□□□□ 0.48
COL27A1-207ENST00000494090 KLHL15Q96M94 604 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 ALG8Q9BVK2 526 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 SLC35A3Q9Y2D2 325 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 TRIM64CA6NLI5 447 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 CRHBPP24387 322 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 SLC7A9P82251 487 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 ABHD12BQ7Z5M8 362 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-207ENST00000494090 OR5AK2Q8NH90 309 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 TCEAL4Q96EI5 215 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 CASD1Q96PB1 797 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 LINC00597Q9H2U6 94 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 OR6C2Q9NZP2 312 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 CNIH4Q9P003 139 aa18.06■□□□□ 0.48
COL27A1-207ENST00000494090 RGPD5Q99666 1765 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 ANTXRLA6NF34 631 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 MROH6A6NGR9 719 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 NARSO43776 548 aaKnown RBP18.05■□□□□ 0.48
COL27A1-207ENST00000494090 PPP1R3DO95685 299 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 CERS1P27544 350 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 P2RY2P41231 377 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 EMX1Q04741 257 aaPredicted RBP18.05■□□□□ 0.48
COL27A1-207ENST00000494090 NR0B2Q15466 257 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 COL28A1Q2UY09 1125 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 Q6ZSR6 202 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 PAQR9Q6ZVX9 377 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 BEST3Q8N1M1 668 aa18.05■□□□□ 0.48
COL27A1-207ENST00000494090 DTD2Q96FN9 168 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms