RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 COX20Q5RI15 118 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCM2-217ENST00000492883 APOOLQ6UXV4 268 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 TRILQ7L0X0 811 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 SPATA21Q7Z572 469 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 GATSQ8NAP1 163 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 TSPEARQ8WU66 669 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 ROPN1LQ96C74 230 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
CCM2-217ENST00000492883 RTN4RQ9BZR6 473 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 SLC6A15Q9H2J7 730 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 UBQLN3Q9H347 655 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 DSN1Q9H410 356 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 HHATLQ9HCP6 504 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 SAR1AQ9NR31 198 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 MED11Q9P086 117 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 SLAMF8Q9P0V8 285 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 SH3BGRL2Q9UJC5 107 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 LIPGQ9Y5X9 500 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 C17orf51A8MQB3 221 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 NPIPA2E9PIF3 369 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 NPIPA3F8WFD2 350 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 H3BNH8 94 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 PRRG2O14669 202 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 SUSD5O60279 629 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 FCMRO60667 390 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 HCN1O60741 890 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 CCDC22O60826 627 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 HPNP05981 417 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 STSP08842 583 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 DCTP40126 519 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 MAGEA8P43361 318 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 ATP12AP54707 1039 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 HPCAP84074 193 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 KLF10Q13118 480 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 WIPI1Q5MNZ9 446 aaPredicted RBP12.73□□□□□ -0.37
CCM2-217ENST00000492883 LRIF1Q5T3J3 769 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 C1QL3Q5VWW1 255 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 OLIG3Q7RTU3 272 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 YRDCQ86U90 279 aaKnown RBP12.73□□□□□ -0.37
CCM2-217ENST00000492883 ZNF614Q8N883 585 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 OR14L1PQ8NHC6 308 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 RAD21L1Q9H4I0 556 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 PTGES2Q9H7Z7 377 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.73□□□□□ -0.37
CCM2-217ENST00000492883 DKKL1Q9UK85 242 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 FBXL2Q9UKC9 423 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 ACAD8Q9UKU7 415 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 MKLN1Q9UL63 735 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 LIPT1Q9Y234 373 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 ZNF835Q9Y2P0 537 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 WDR45Q9Y484 360 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 BSNQ9UPA5 3926 aa12.73□□□□□ -0.37
CCM2-217ENST00000492883 TLN1Q9Y490 2541 aaKnown RBP12.72□□□□□ -0.37
CCM2-217ENST00000492883 LOC100653049A0A140TA62 436 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 A0A1B0GUH1 482 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 A0A1B0GVC2 190 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 A0A1W2PQD3 144 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 OR14I1A6ND48 311 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 AQP7O14520 342 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 LRRTM2O43300 516 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 GMFGO60234 142 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 KRT34O76011 436 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 TPOP07202 933 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 NR2F1P10589 423 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 ETFAP13804 333 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 DRD4P21917 467 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 PPIBP23284 216 aaKnown RBP12.72□□□□□ -0.37
CCM2-217ENST00000492883 DPP4P27487 766 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 ADSLP30566 484 aaPredicted RBP12.72□□□□□ -0.37
CCM2-217ENST00000492883 GCKP35557 465 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 DSTNP60981 165 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 MAPRE2Q15555 327 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 SYPL1Q16563 259 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 C3AR1Q16581 482 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 MMEL1Q495T6 779 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 EIPR1Q53HC9 387 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 FGD2Q7Z6J4 655 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 MISPQ8IVT2 679 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
CCM2-217ENST00000492883 OR2M3Q8NG83 312 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 FAM57AQ8TBR7 257 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 PHOSPHO1Q8TCT1 267 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 SARAFQ96BY9 339 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 NMUR2Q9GZQ4 415 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 ZNF350Q9GZX5 532 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 THUMPD1Q9NXG2 353 aaKnown RBP12.72□□□□□ -0.37
CCM2-217ENST00000492883 TAS2R10Q9NYW0 307 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 SLC25A37Q9NYZ2 338 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 TNFRSF10DQ9UBN6 386 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 SLC6A5Q9Y345 797 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 HRH3Q9Y5N1 445 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 CROCCQ5TZA2 2017 aa12.72□□□□□ -0.37
CCM2-217ENST00000492883 BOD1L1Q8NFC6 3051 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms