RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 KRTAP24-1Q3LI83 254 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 FREM1Q5H8C1 2179 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 SEZ6L2Q6UXD5 910 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 DTX2Q86UW9 622 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 STK32CQ86UX6 486 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 SLC44A2Q8IWA5 706 aaPredicted RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 C1orf52Q8N6N3 182 aaKnown RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 PTGR2Q8N8N7 351 aaPredicted RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 OR7G2Q8NG99 324 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 OR4F6Q8NGB9 312 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 OR5M1Q8NGP8 315 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 OR9A2Q8NGT5 310 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 OR10D3Q8NH80 312 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 FBF1Q8TES7 1133 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 DUSP19Q8WTR2 217 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 KAT2AQ92830 837 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 MTBPQ96DY7 904 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 NSUN5Q96P11 429 aaKnown RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 ERP44Q9BS26 406 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 TACO1Q9BSH4 297 aaKnown RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 TRAF4Q9BUZ4 470 aaPredicted RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 HDHD5Q9BXW7 423 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 PRRG4Q9BZD6 226 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 ESRP2Q9H6T0 727 aaKnown RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 ZFAND3Q9H8U3 227 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 NGBQ9NPG2 151 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 FARSBQ9NSD9 589 aaKnown RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 NMRK1Q9NWW6 199 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 GRHL1Q9NZI5 618 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 CPSF2Q9P2I0 782 aaKnown RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 MCM8Q9UJA3 840 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 MCTS1Q9ULC4 181 aaKnown RBP7.31□□□□□ -1.24
USP39-216ENST00000490193 OR10H1Q9Y4A9 318 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 SNX8Q9Y5X2 465 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 CADP27708 2225 aa7.31□□□□□ -1.24
USP39-216ENST00000490193 A0A087WZY1 265 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 UQCRHLA0A096LP55 91 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 A0A096LPK6 155 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 A0A1W2PP18 115 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 EIF1AYO14602 144 aaKnown RBP7.3□□□□□ -1.24
USP39-216ENST00000490193 NDUFS7O75251 213 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 IL33O95760 270 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 OTCP00480 354 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 CD8AP01732 235 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 TUBBP07437 444 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 CD3EP07766 207 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 IL3P08700 152 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 RPS17P08708 135 aaKnown RBP7.3□□□□□ -1.24
USP39-216ENST00000490193 PSMA4P25789 261 aaKnown RBP7.3□□□□□ -1.24
USP39-216ENST00000490193 ADH6P28332 368 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 MPIP34949 423 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 EIF1AXP47813 144 aaKnown RBP7.3□□□□□ -1.24
USP39-216ENST00000490193 CLK3P49761 638 aaKnown RBP7.3□□□□□ -1.24
USP39-216ENST00000490193 PRR5P85299 388 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 VLDLRP98155 873 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 C17orf67Q0P5P2 114 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 STX5Q13190 355 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 HEPACAMQ14CZ8 416 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 NRF1Q16656 503 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 DECR1Q16698 335 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 LETMD1Q6P1Q0 360 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 FAM9CQ8IZT9 166 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 GABRG1Q8N1C3 465 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 LINC00528Q8N1L1 170 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 GTPBP8Q8N3Z3 284 aaPredicted RBP7.3□□□□□ -1.24
USP39-216ENST00000490193 OR10H5Q8NGA6 315 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 SELENOMQ8WWX9 145 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 ROBO4Q8WZ75 1007 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 S100PBPQ96BU1 408 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 PHF21BQ96EK2 531 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 HS6ST2Q96MM7 605 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 C1QTNF3Q9BXJ4 246 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 TRIM2Q9C040 744 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 AMBRA1Q9C0C7 1298 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 HHATLQ9HCP6 504 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 PFDN4Q9NQP4 134 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 SLC35C2Q9NQQ7 365 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 FLRT3Q9NZU0 649 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 VPS29Q9UBQ0 182 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 LPAR3Q9UBY5 353 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 CLEC4AQ9UMR7 237 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 SNX6Q9UNH7 406 aa7.3□□□□□ -1.24
USP39-216ENST00000490193 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.29□□□□□ -1.245e-8■■■■■ 29.2
USP39-216ENST00000490193 ELOA3DA6NLF2 546 aaPredicted RBP7.29□□□□□ -1.24
USP39-216ENST00000490193 MYO1GB0I1T2 1018 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SHISA8B8ZZ34 492 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 CLOCKO15516 846 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 ZSCAN12O43309 604 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 CXCL13O43927 109 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GPRIN2O60269 458 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SYNGR4O95473 234 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 ANGPTL1O95841 491 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 FESP07332 822 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 RBP1P09455 135 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 IFI6P09912 130 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 TYK2P29597 1187 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 MAGEA12P43365 314 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 GSTM5P46439 218 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 SERPINB8P50452 374 aa7.29□□□□□ -1.24
USP39-216ENST00000490193 PSMD4P55036 377 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms