RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RAB1AP62820 205 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 HTRA3P83110 453 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 NXNL2Q5VZ03 156 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 LRRTM4Q86VH4 590 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 OR2A12Q8NGT7 310 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 TRMT2BQ96GJ1 504 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 WDR77Q9BQA1 342 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 CPPED1Q9BRF8 314 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 MENTQ9BUN1 341 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ALG8Q9BVK2 526 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 PKIBQ9C010 78 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SHARPINQ9H0F6 387 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 KCNG2Q9UJ96 466 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 C15orf41Q9Y2V0 281 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 RNF17Q9BXT8 1623 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 PRAMEF27A3QJZ7 478 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 TO15178 435 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SCO2O43819 266 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CYTIPO60759 359 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 PROCP04070 461 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 TPOP07202 933 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CDH1P12830 882 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 GSK3BP49841 420 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 HLCSP50747 726 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ERHP84090 104 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 GLO1Q04760 184 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 Q6ZN92 141 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ADIPOR2Q86V24 386 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CACUL1Q86Y37 369 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ENTHD1Q8IYW4 607 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 FAM151AQ8WW52 585 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 OR4C12Q96R67 309 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 MYADMQ96S97 322 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 FOXC2Q99958 501 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CELF4Q9BZC1 486 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 NMNAT2Q9BZQ4 307 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 MED17Q9NVC6 651 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 GPR34Q9UPC5 381 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 EXO1Q9UQ84 846 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 C12orf71A8MTZ7 269 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ZNF99A8MXY4 864 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 TRAPPC2LH3BP13 241 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 J3QRK9 145 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 TPST2O60704 377 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ADRB3P13945 408 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ATP1B2P14415 290 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 FOLR3P41439 243 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 DCAF7P61962 342 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 PAFAH1B2P68402 229 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ARG2P78540 354 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 MRPS6P82932 125 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 EIF4HQ15056 248 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.16□□□□□ -1.58
USF3-202ENST00000478658 ALKBH6Q3KRA9 238 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 POMZP3Q6PJE2 187 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 TSEN54Q7Z6J9 526 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 BPHLQ86WA6 291 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 SIGLECL1Q8N7X8 197 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 OR1J1Q8NGS3 322 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 FBXL8Q96CD0 374 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 HYLS1Q96M11 299 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 FAM173AQ9BQD7 235 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 NKX6-2Q9C056 277 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 QRSL1Q9H0R6 528 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 OR51V1Q9H2C8 321 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CDC42EP4Q9H3Q1 356 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 GIMAP2Q9UG22 337 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SALL4Q9UJQ4 1053 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 AMMECR1Q9Y4X0 333 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 LMX1BO60663 402 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 OAS1P00973 400 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 HPNP05981 417 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ACAA1P09110 424 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 AGTR2P50052 363 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CASP7P55210 303 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 KLF1Q13351 362 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 MICAQ29983 383 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CTC1Q2NKJ3 1217 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SBSNQ6UWP8 590 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ILDR1Q86SU0 546 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 SULF2Q8IWU5 870 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SLC38A6Q8IZM9 456 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SLC35G3Q8N808 338 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 RBM15BQ8NDT2 890 aaKnown RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 OR51A4Q8NGJ6 313 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 MARCH1Q8TCQ1 289 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SLC39A7Q92504 469 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 PSMF1Q92530 271 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 MAP4K1Q92918 833 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 SLC25A36Q96CQ1 311 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CIB3Q96Q77 187 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 ALG9Q9H6U8 611 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 C8orf33Q9H7E9 229 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 SEMA4BQ9NPR2 832 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 OR2T8A6NH00 312 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 LIASO43766 372 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 CBX7O95931 251 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 TTRP02766 147 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 C7P10643 843 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms