RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 C4orf17Q53FE4 359 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 EMC4Q5J8M3 183 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 WIPI1Q5MNZ9 446 aaPredicted RBP8.83□□□□□ -1
HDAC3-208ENST00000476739 DCST2Q5T1A1 773 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 ARHGAP11AQ6P4F7 1023 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 SLC2A7Q6PXP3 512 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 ZNF621Q6ZSS3 439 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 YRDCQ86U90 279 aaKnown RBP8.83□□□□□ -1
HDAC3-208ENST00000476739 CD163Q86VB7 1156 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 RNF130Q86XS8 419 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 RPRMLQ8N4K4 120 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 GATSQ8NAP1 163 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 FAM57AQ8TBR7 257 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 PNPT1Q8TCS8 783 aaKnown RBP8.83□□□□□ -1
HDAC3-208ENST00000476739 RELTQ969Z4 430 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 NEURL3Q96EH8 262 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 PHF12Q96QT6 1004 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 SH3GL3Q99963 347 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 KLHDC3Q9BQ90 382 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 DSN1Q9H410 356 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 CCDC134Q9H6E4 229 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 LDAHQ9H6V9 325 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 ACKR4Q9NPB9 350 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 PNPLA3Q9NST1 481 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 QPCTLQ9NXS2 382 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 MED11Q9P086 117 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 SLAMF8Q9P0V8 285 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 MRTO4Q9UKD2 239 aaKnown RBP8.83□□□□□ -1
HDAC3-208ENST00000476739 SLC5A6Q9Y289 635 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 SLC6A5Q9Y345 797 aa8.83□□□□□ -1
HDAC3-208ENST00000476739 DOPEY2Q9Y3R5 2298 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 CENPVL1A0A0U1RR11 272 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 WIPF3A6NGB9 483 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 NR5A2O00482 541 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 CCL21O00585 134 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 AQP7O14520 342 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 RFXANKO14593 260 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 GMFGO60234 142 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 SUSD5O60279 629 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 ZIC3O60481 467 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 FCMRO60667 390 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 ANGPTL1O95841 491 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 NCF2P19878 526 aaPredicted RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 CAPN3P20807 821 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 TBXA2RP21731 343 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 TCEA1P23193 301 aaKnown RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 ELAVL4P26378 380 aaKnown RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 ATP4BP51164 291 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 MVDP53602 400 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 PSMD4P55036 377 aaKnown RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 STX1BP61266 288 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 FUT5Q11128 374 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 RCAN2Q14206 197 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 SQLEQ14534 574 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 TOMM20Q15388 145 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 CD226Q15762 336 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 GXYLT1Q4G148 440 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 AGKQ53H12 422 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 PAGE3Q5JUK9 113 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 COX20Q5RI15 118 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 DCST1Q5T197 706 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC3-208ENST00000476739 BHLHB9Q6PI77 547 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 PLCZ1Q86YW0 608 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 MARVELD2Q8N4S9 558 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 FADS6Q8N9I5 356 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 CHDHQ8NE62 594 aaPredicted RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 FAM83FQ8NEG4 500 aaPredicted RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 OR2M3Q8NG83 312 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 OR5M9Q8NGP3 310 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 NEIL3Q8TAT5 605 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 MIPOL1Q8TD10 442 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 ZFP90Q8TF47 636 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 DUSP19Q8WTR2 217 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 XAGE5Q8WWM1 108 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 STON2Q8WXE9 905 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 GTF2H4Q92759 462 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 AURKBQ96GD4 344 aaPredicted RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 CCDC120Q96HB5 630 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 ZNF317Q96PQ6 595 aaPredicted RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 SDF2Q99470 211 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 EXO5Q9H790 373 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 PPP4R1LQ9P1A2 415 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 B4GALT7Q9UBV7 327 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 KCNE5Q9UJ90 142 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 ABCG2Q9UNQ0 655 aa8.82□□□□□ -1
HDAC3-208ENST00000476739 DIDO1Q9BTC0 2240 aaKnown RBP8.82□□□□□ -1
HDAC3-208ENST00000476739 KDM4EB2RXH2 506 aaPredicted RBP8.81□□□□□ -1
HDAC3-208ENST00000476739 ALG1L2C9J202 215 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 NPIPB9F8W1W9 429 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 HMGN4O00479 90 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 PRRG2O14669 202 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 OIP5O43482 229 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 HCN1O60741 890 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 ZG16O60844 167 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 CBR3O75828 277 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 NGFRP08138 427 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 KRT16P08779 473 aa8.81□□□□□ -1
HDAC3-208ENST00000476739 HOXB9P17482 250 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms