RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FAM71F2Q6NXP2 309 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 TMEM184AQ6ZMB5 413 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 LEKR1Q6ZMV7 388 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 C19orf35Q6ZS72 473 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 CHMP1BQ7LBR1 199 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ANKRD37Q7Z713 158 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 MOB3BQ86TA1 216 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 SERPINA9Q86WD7 417 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 METTL27Q8N6F8 245 aaPredicted RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 TRIML2Q8N7C3 387 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 GVQW1Q8N7I0 195 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 MFSD9Q8NBP5 474 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 DMBX1Q8NFW5 382 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 OR4D10Q8NGI6 311 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 NUDCD2Q8WVJ2 157 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ADIPOR1Q96A54 375 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ATP6V1G3Q96LB4 118 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 C2orf48Q96LS8 159 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 SLC38A2Q96QD8 506 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 CCT8L2Q96SF2 557 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ST6GALNAC5Q9BVH7 336 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PAPOLGQ9BWT3 736 aaKnown RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 TDRD1Q9BXT4 1180 aaKnown RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 DNTTIP1Q9H147 329 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 C6orf106Q9H6K1 298 aaPredicted RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 SUDS3Q9H7L9 328 aaPredicted RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 SYNDIG1Q9H7V2 258 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PLEKHA3Q9HB20 300 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 INTS9Q9NV88 658 aaKnown RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 SLC7A8Q9UHI5 535 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PURGQ9UJV8 347 aaKnown RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ANAPC7Q9UJX3 599 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PRPF19Q9UMS4 504 aaKnown RBP3.64□□□□□ -1.83
VPS13D-207ENST00000476169 ABCG2Q9UNQ0 655 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 PPIAL4AQ9Y536 164 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 TIMM10BQ9Y5J6 103 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 RNF215Q9Y6U7 377 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 NEDD4P46934 1319 aa3.64□□□□□ -1.83
VPS13D-207ENST00000476169 SPATA31D1Q6ZQQ2 1576 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 LRP5LA4QPB2 252 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 GLTPD2A6NH11 291 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 ACOD1A6NK06 481 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TEX46H3BTG2 121 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 HAS3O00219 553 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 WWP2O00308 870 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 OR7A17O14581 309 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 H6PDO95479 791 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 SEC24AO95486 1093 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 IGF1P05019 195 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 UMODP07911 640 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 MCF2P10911 925 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 ETS2P15036 469 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 H2AFXP16104 143 aaPredicted RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 CALML3P27482 149 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 ATP5C1P36542 298 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 RPL13AP40429 203 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 RPS5P46782 204 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 SLC7A2P52569 658 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 CLDN8P56748 225 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 OTUD4Q01804 1114 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 LIPEQ05469 1076 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 BST2Q10589 180 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 CUL1Q13616 776 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 EIF2B1Q14232 305 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 GCKRQ14397 625 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 KNOP1Q1ED39 458 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 IZUMO4Q1ZYL8 232 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 KLHL40Q2TBA0 621 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 SNAI3Q3KNW1 292 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 LIPNQ5VXI9 398 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 PLCXD3Q63HM9 321 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 NEPROQ6NW34 567 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TMEM53Q6P2H8 277 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 LEG1Q6P5S2 330 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 BTNL3Q6UXE8 466 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 VTCN1Q7Z7D3 282 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 DHDDSQ86SQ9 333 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF575Q86XF7 245 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TCAIMQ8N3R3 496 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 SDR9C7Q8NEX9 313 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TSEN15Q8WW01 171 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 C19orf60Q96EN9 201 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TIMD4Q96H15 378 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 ST6GAL2Q96JF0 529 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 PRRC1Q96M27 445 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 CPXM1Q96SM3 734 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 C20orf24Q9BUV8 137 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TRIM62Q9BVG3 475 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 C1QTNF4Q9BXJ3 329 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 ROGDIQ9GZN7 287 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 COMMD4Q9H0A8 199 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 RGCCQ9H4X1 137 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 DDX31Q9H8H2 851 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 MRPL39Q9NYK5 338 aaKnown RBP3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TAS2R16Q9NYV7 291 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms