RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 JCHAINP01591 159 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PRKAR1AP10644 381 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PEPDP12955 493 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 S100A11P31949 105 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ACSL1P33121 698 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 GDNFP39905 211 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SLC1A3P43003 542 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CSNK1DP48730 415 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PITPNBP48739 271 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SPCS3P61009 180 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SLC10A7Q0GE19 358 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 GAGE1Q13065 139 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SNTB1Q13884 538 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 TSC22D1Q15714 1073 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 COA6Q5JTJ3 125 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 CASC4Q6P4E1 433 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 FAM198BQ6UWH4 519 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LINC00114Q6XXX2 140 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RHOUQ7L0Q8 258 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 STX19Q8N4C7 294 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ARL6IP6Q8N6S5 226 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZNF565Q8N9K5 539 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CXorf40AQ8TE69 158 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RIT1Q92963 219 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CPNE4Q96A23 557 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 NEURL3Q96EH8 262 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 KCTD7Q96MP8 289 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 PLA2G12AQ9BZM1 189 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 TINAGL1Q9GZM7 467 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 POLR1EQ9GZS1 481 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 HRASLSQ9HDD0 168 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 C11orf16Q9NQ32 467 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ENAMQ9NRM1 1142 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 WDR70Q9NW82 654 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 KLHL8Q9P2G9 620 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 CORO2BQ9UQ03 480 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 TP53TG5Q9Y2B4 290 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 STARD10Q9Y365 291 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PCDHB9Q9Y5E1 797 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SLC22A7Q9Y694 548 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ARGFXA6NJG6 315 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 C2orf81A6NN90 581 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ANHXE9PGG2 379 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RNF13O43567 381 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ICOSLGO75144 302 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 GADD45GO95257 159 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CSF2P04141 144 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SRPRAP08240 638 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 IGFBP1P08833 259 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 FURINP09958 794 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 COX5BP10606 129 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ATF4P18848 351 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 CNR1P21554 472 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 HTR1FP30939 366 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PNPLA4P41247 253 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PTGFRP43088 359 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PTGER3P43115 390 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 MAPK9P45984 424 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PDLIM4P50479 330 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RIDAP52758 137 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 TAS2R60P59551 318 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CD81P60033 236 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RAC1P63000 192 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 MRPS15P82914 257 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 SRSF3P84103 164 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 PRR5P85299 388 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SSBP1Q04837 148 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 SCRN3Q0VDG4 424 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TMEM115Q12893 351 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 MS4A13Q5J8X5 152 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 DOK6Q6PKX4 331 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 FRRS1Q6ZNA5 592 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 DENND1CQ8IV53 801 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SIAH3Q8IW03 269 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 C15orf54Q8N8G6 183 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 OR4Q3Q8NH05 313 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RXFP4Q8TDU9 374 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 DIO2Q92813 273 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 ECHDC3Q96DC8 303 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 MTERF3Q96E29 417 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 MOGAT1Q96PD6 335 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 SFXN1Q9H9B4 322 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CACYBPQ9HB71 228 aaKnown RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 LRTM1Q9HBL6 345 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CATSPERZQ9NTU4 200 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TMLHEQ9NVH6 421 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TMEM184BQ9Y519 407 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 ACOD1A6NK06 481 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 M0R129 80 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 LGALS8O00214 317 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 CASKO14936 926 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TOX3O15405 576 aaPredicted RBP3.81□□□□□ -1.8
USP16-205ENST00000474835 FFAR2O15552 330 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 RGS14O43566 566 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 WISP2O76076 250 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 PRAMEF1O95521 474 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 IFNA2P01563 188 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 URODP06132 367 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 GJB1P08034 283 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms