RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PCDHGB6Q9Y5F9 930 aa6.4□□□□□ -1.38
LIMD1-204ENST00000474665 INTS1Q8N201 2190 aaKnown RBP6.4□□□□□ -1.39
LIMD1-204ENST00000474665 NPIPA5A0A0B4J1W7 369 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ANKRD33BA6NCL7 494 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 LRRC3CA6NJW4 275 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 TTC36A6NLP5 189 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 NPIPA7E9PJI5 369 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 MRASO14807 208 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ANGPT2O15123 496 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ABCB7O75027 752 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 BCAS1O75363 584 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 TRIM3O75382 744 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GLSO94925 669 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 CHRM4P08173 479 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ALOX5P09917 674 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 TFPTP0C1Z6 253 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 NPIPA8P0DM63 369 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GPX2P18283 190 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 SLC6A2P23975 617 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 CHI3L1P36222 383 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 RFC3P40938 356 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 CASP3P42574 277 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 DNASE1L1P49184 302 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 PRIM2P49643 509 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 PNLIPRP2P54317 469 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GPR85P60893 370 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 POU6F2P78424 691 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 PLAURQ03405 335 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 PLCXD2Q0VAA5 305 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 CYLC2Q14093 348 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 RGNQ15493 299 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 MAPK14Q16539 360 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 SYPL1Q16563 259 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 TRMT5Q32P41 509 aaKnown RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GRAMD1BQ3KR37 738 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 RABL3Q5HYI8 236 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 DCST2Q5T1A1 773 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GKAP1Q5VSY0 366 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 PRAMEF20Q5VT98 475 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 SLC22A10Q63ZE4 541 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF324BQ6AW86 544 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 NANOGP8Q6NSW7 305 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM81Q6P7N7 255 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 BHLHB9Q6PI77 547 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 RTL4Q6ZR62 310 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 NUP54Q7Z3B4 507 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 DHDDSQ86SQ9 333 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 LSRQ86X29 649 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 PTOV1Q86YD1 416 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 HPS6Q86YV9 775 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 SIAH3Q8IW03 269 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GPALPP1Q8IXQ4 340 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 FBXW8Q8N3Y1 598 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 COX18Q8N8Q8 333 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 WDSUB1Q8N9V3 476 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ZFP62Q8NB50 900 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 POGLUT1Q8NBL1 392 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 CCDC197Q8NCU1 140 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 FAM13CQ8NE31 585 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 OR52N2Q8NGI0 321 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 RP9Q8TA86 221 aaKnown RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 BCAS4Q8TDM0 211 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 SLC38A5Q8WUX1 472 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 XAGE5Q8WWM1 108 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 TM9SF4Q92544 642 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 JADE3Q92613 823 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 MAL2Q969L2 176 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF524Q96C55 264 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 LRRC58Q96CX6 371 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 FRMD6Q96NE9 622 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 COL21A1Q96P44 957 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 LRRC37BQ96QE4 947 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GPATCH1Q9BRR8 931 aaKnown RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ANGPTL4Q9BY76 406 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF350Q9GZX5 532 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 SAP130Q9H0E3 1048 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 RUBCNLQ9H714 662 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 NANOGQ9H9S0 305 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 GALNT9Q9HCQ5 603 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 Q9N2J8 555 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 TUBA8Q9NY65 449 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 FAF1Q9UNN5 650 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-204ENST00000474665 USP22Q9UPT9 525 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 OR10H1Q9Y4A9 318 aa6.39□□□□□ -1.39
LIMD1-204ENST00000474665 MED12LQ86YW9 2145 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 PRSS44E7EML9 344 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 NDUFAB1O14561 156 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 AIM2O14862 343 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 OIP5O43482 229 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 ASNA1O43681 348 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 PEX1O43933 1283 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 GCM2O75603 506 aaPredicted RBP6.38□□□□□ -1.39
LIMD1-204ENST00000474665 KCNH1O95259 989 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 UTS2O95399 124 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 CBX6O95503 412 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 KRT75O95678 551 aa6.38□□□□□ -1.39
LIMD1-204ENST00000474665 NGFRP08138 427 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms