RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 A0A1W2PPV9 198 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 SNTNA6NMZ2 147 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 E9PQ18 207 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 GOLGA8SH3BPF8 625 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 BTN3A3O00478 584 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 GPIP06744 558 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 FHP07954 510 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ALPIP09923 528 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 DPP4P27487 766 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 SYKP43405 635 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 RAD23BP54727 409 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 KRTAP10-2P60368 255 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 HERVK_113P63132 956 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 MRPS6P82932 125 aaKnown RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 ZP4Q12836 540 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 SLAQ13239 276 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 FILIP1LQ4L180 1135 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 EFHC1Q5JVL4 640 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 DMKNQ6E0U4 476 aaPredicted RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 ACSM5Q6NUN0 579 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 CCNI2Q6ZMN8 369 aaPredicted RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.32□□□□□ -2.04
XRN1-210ENST00000472697 EIF3MQ7L2H7 374 aaKnown RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 OTUD6AQ7L8S5 288 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 STXBP6Q8NFX7 210 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 SLC26A7Q8TE54 656 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 FCAMRQ8WWV6 532 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ERVK-6Q9BXR3 956 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 TDRD1Q9BXT4 1180 aaKnown RBP2.32□□□□□ -2.04
XRN1-210ENST00000472697 PRSS22Q9GZN4 317 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 SGK2Q9HBY8 427 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ZNF446Q9NWS9 450 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 SPHK1Q9NYA1 384 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 PIPOXQ9P0Z9 390 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 BCAP29Q9UHQ4 241 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ZDHHC2Q9UIJ5 367 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 DLGAP4Q9Y2H0 992 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 POLDIP2Q9Y2S7 368 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 NCANO14594 1321 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 ZNF318Q5VUA4 2279 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 DUOX1Q9NRD9 1551 aa2.32□□□□□ -2.04
XRN1-210ENST00000472697 A0A087WZ39 114 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 G3V2L1 256 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 GOLGA8TH3BQL2 631 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 L7N2F9 121 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 P2RY10O00398 339 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 FCN1O00602 326 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 JAK2O60674 1132 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SERPINI2O75830 405 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 NDUFA7O95182 113 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 LGI1O95970 557 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CAPN1P07384 714 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 HIST1H2AGP0C0S8 130 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 CT45A8P0DMV1 189 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CT45A9P0DMV2 189 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ATP1B2P14415 290 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 PLA2G2AP14555 144 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 HTR2AP28223 471 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 GLIPR1P48060 266 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CCT3P49368 545 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 UBE2MP61081 183 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 SSTP61278 116 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ST3GAL3Q11203 375 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SELENBP1Q13228 472 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 ITIH4Q14624 930 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SLC5A12Q1EHB4 618 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CT45A2Q5DJT8 189 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SUMO4Q6EEV6 95 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 RCOR2Q8IZ40 523 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 CENPSQ8N2Z9 138 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 MFSD9Q8NBP5 474 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 OR52K1Q8NGK4 314 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 OR13C3Q8NGS6 347 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 FAM81AQ8TBF8 368 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SLC2A14Q8TDB8 520 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 HIST1H2ACQ93077 130 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 TOP1MTQ969P6 601 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 MOCOSQ96EN8 888 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 DUSP26Q9BV47 211 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 RBM24Q9BX46 236 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 DUSP16Q9BY84 665 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 FAM124BQ9H5Z6 455 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 FNDC4Q9H6D8 234 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 EXO5Q9H790 373 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 TMEM185BQ9H7F4 350 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 DCAF13Q9NV06 445 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 AURKAIP1Q9NWT8 199 aaPredicted RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 KLHL28Q9NXS3 571 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 TAS2R16Q9NYV7 291 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 SLC17A6Q9P2U8 582 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 EPHA6Q9UF33 1036 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 AGO1Q9UL18 857 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 FZR1Q9UM11 496 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 PRPF19Q9UMS4 504 aaKnown RBP2.31□□□□□ -2.04
XRN1-210ENST00000472697 CACNA1SQ13698 1873 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 TJP1Q07157 1748 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 MRC1P22897 1456 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 EVC2Q86UK5 1308 aa2.31□□□□□ -2.04
XRN1-210ENST00000472697 TRAV25A0A0B4J276 109 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms