RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GAL3ST3Q96A11 431 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 FYTTD1Q96QD9 318 aaKnown RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 TIMP4Q99727 224 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 HDHD5Q9BXW7 423 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 FN3KQ9H479 309 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 TRPV4Q9HBA0 871 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF223Q9UK11 482 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 RWDD3Q9Y3V2 267 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 STON1Q9Y6Q2 735 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 LINC01553A4QN01 128 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ANKRD34BA5PLL1 514 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 CDC42EP2O14613 210 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 PIP5K1CO60331 668 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 SLC2A10O95528 541 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ADH1BP00325 375 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 CSF2P04141 144 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 THBS1P07996 1170 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ZGLP1P0C6A0 271 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF24P17028 368 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 CLDN20P56880 219 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 RACK1P63244 317 aaKnown RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 EEF1A1P68104 462 aaKnown RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF791Q3KP31 576 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ARHGAP11BQ3KRB8 267 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 MZT2BQ6NZ67 158 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 PLET1Q6UQ28 207 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 OR2L13Q8N349 312 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 SIRT6Q8N6T7 355 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 C12orf76Q8N812 135 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 SLC16A11Q8NCK7 471 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 NLGN4YQ8NFZ3 816 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 NT5CQ8TCD5 201 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ACOT12Q8WYK0 555 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 SECISBP2Q96T21 854 aaKnown RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 PRSS27Q9BQR3 290 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 TMEM246Q9BRR3 403 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 TTYH2Q9BSA4 534 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 TMED9Q9BVK6 235 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 TWSG1Q9GZX9 223 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 UBQLN3Q9H347 655 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 C6orf106Q9H6K1 298 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 GTPBP1O00178 669 aaKnown RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 SOCS6O14544 535 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 SLC19A2O60779 497 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 KAT7O95251 611 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 RPS4Y1P22090 263 aaKnown RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 GJA4P35212 333 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 MTNR1BP49286 362 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 DUSP8Q13202 625 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 KRT33BQ14525 404 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 SF3A2Q15428 464 aaKnown RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 C6orf183Q5T699 404 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 TRIQKQ629K1 86 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF836Q6ZNA1 936 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF438Q7Z4V0 828 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 GID4Q8IVV7 300 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 HDDC3Q8N4P3 179 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 C19orf18Q8NEA5 215 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 FGF13Q92913 245 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 FAM131CQ96AQ9 280 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 MARVELD1Q9BSK0 173 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 TBC1D17Q9HA65 648 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 PRDM9Q9NQV7 894 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 PAQR5Q9NXK6 330 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-209ENST00000470026 KCMF1Q9P0J7 381 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 TNFRSF10DQ9UBN6 386 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 KLF15Q9UIH9 416 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 CSNK1G3Q9Y6M4 447 aa12.73□□□□□ -0.37
BRCA1-209ENST00000470026 LYRM1O43325 122 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 LYPD3O95274 346 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 PRKAR1AP10644 381 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 FXYD6P3P58550 94 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 BTN3A2P78410 334 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 TNFRSF17Q02223 184 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 TATDN3Q17R31 274 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 Q5BKY6 102 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 CPOQ8IVL8 374 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 SAMD14Q8IZD0 417 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-209ENST00000470026 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-209ENST00000470026 CDS1Q92903 461 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 SAMD8Q96LT4 415 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 ADAM30Q9UKF2 790 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
BRCA1-209ENST00000470026 A0A1W2PP55 124 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 A6NL46 340 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 BHLHE40O14503 412 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 RNF13O43567 381 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 HRO43593 1189 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 SLC43A1O75387 559 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 NCR1O76036 304 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 CD53P19397 219 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 IGFALSP35858 605 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 GCGRP47871 477 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 INSL4Q14641 139 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 EIPR1Q53HC9 387 aa12.71□□□□□ -0.37
BRCA1-209ENST00000470026 TMEM240Q5SV17 173 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms