RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ALG1L2C9J202 215 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 HMGN4O00479 90 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 SCDO00767 359 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 ADAM10O14672 748 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNHIT1O43257 154 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 HCN1O60741 890 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 OXSR1O95747 527 aaPredicted RBP13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 ANGPTL1O95841 491 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 HPNP05981 417 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 STSP08842 583 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 ABOP16442 354 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 LSP1P33241 339 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 PTGS2P35354 604 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 MAGEA8P43361 318 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 ANXA11P50995 505 aaKnown RBP13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 SEC24CP53992 1094 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 FLYWCH1Q4VC44 716 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 PAGE3Q5JUK9 113 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 HEPHL1Q6MZM0 1159 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 FGD2Q7Z6J4 655 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 TSPEARQ8WU66 669 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 C10orf82Q8WW14 230 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 EXO5Q9H790 373 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 TPT1P8Q9HAU6 139 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 LIPGQ9Y5X9 500 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 HIVEP3Q5T1R4 2406 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 TRGV8A0A0C4DH27 118 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 GMNCA6NCL1 334 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 C17orf51A8MQB3 221 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 NDUFB5O43674 189 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 STX11O75558 287 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 DCTP40126 519 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 ATP12AP54707 1039 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 CASP6P55212 293 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 GNGT1P63211 74 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 STX5Q13190 355 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 GTDC1Q4AE62 458 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 COX20Q5RI15 118 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 LRIF1Q5T3J3 769 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 Q6ZPB1 254 aaPredicted RBP13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNF527Q8NB42 609 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 OR4K17Q8NGC6 315 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 NEIL3Q8TAT5 605 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 DTNBP1Q96EV8 351 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 ELAC2Q9BQ52 826 aaKnown RBP13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 DSN1Q9H410 356 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 HHATLQ9HCP6 504 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 SAR1AQ9NR31 198 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 MED11Q9P086 117 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 SLAMF8Q9P0V8 285 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 LEF1Q9UJU2 399 aaPredicted RBP13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 FBXL2Q9UKC9 423 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 NDUFAF1Q9Y375 327 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
SQSTM1-205ENST00000464493 NPIPA5A0A0B4J1W7 369 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 OR14I1A6ND48 311 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 NPIPA2E9PIF3 369 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 NPIPA7E9PJI5 369 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 NPIPA3F8WFD2 350 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 CLIC1O00299 241 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 AQP7O14520 342 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 PRRG2O14669 202 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 ANGPT2O15123 496 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 LRRTM2O43300 516 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 FCMRO60667 390 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 GUSBP08236 651 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 SNRPB2P08579 225 aaKnown RBP13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 NPIPA8P0DM63 369 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 CRATP43155 626 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 MVDP53602 400 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 UBAP2LQ14157 1087 aaKnown RBP13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 GPR68Q15743 365 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 C3AR1Q16581 482 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 GPAT3Q53EU6 434 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 C4orf17Q53FE4 359 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 KLHL26Q53HC5 615 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 EIPR1Q53HC9 387 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 CPLX4Q7Z7G2 160 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 MISPQ8IVT2 679 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 FAM26EQ8N5C1 309 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 FADS6Q8N9I5 356 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 FAM83FQ8NEG4 500 aaPredicted RBP13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 OR2M3Q8NG83 312 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 ROPN1LQ96C74 230 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 AURKBQ96GD4 344 aaPredicted RBP13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 NMUR2Q9GZQ4 415 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNF350Q9GZX5 532 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 FAM107BQ9H098 131 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 NSRP1Q9H0G5 558 aaKnown RBP13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 SLC6A15Q9H2J7 730 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 MKLN1Q9UL63 735 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 LIPT1Q9Y234 373 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 SLC5A6Q9Y289 635 aa13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 MRPS18CQ9Y3D5 142 aaKnown RBP13.21□□□□□ -0.29
SQSTM1-205ENST00000464493 PCNX3Q9H6A9 2034 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 IGLV3-32A0A0A0MS00 114 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms