RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 IL17RCQ8NAC3 791 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 UXS1Q8NBZ7 420 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 ADAMTS14Q8WXS8 1223 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 ZNF578Q96N58 590 aaPredicted RBP10.96□□□□□ -0.65
CPSF3-202ENST00000460593 SLC38A2Q96QD8 506 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 FAIM2Q9BWQ8 316 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 HCAR1Q9BXC0 346 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 TMEM168Q9H0V1 697 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 HINT3Q9NQE9 182 aaKnown RBP10.96□□□□□ -0.65
CPSF3-202ENST00000460593 TNFRSF10DQ9UBN6 386 aa10.96□□□□□ -0.65
CPSF3-202ENST00000460593 IGLV3-16A0A075B6K0 115 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 A0A1W2PRQ8 180 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 TRABD2BA6NFA1 517 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ZNF197O14709 1029 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 PDCD5O14737 125 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ARPC5O15511 151 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 UCHL1P09936 223 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 NPR2P20594 1047 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 OR1D2P34982 312 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 SP140Q13342 867 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ETFDHQ16134 617 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 TAF12Q16514 161 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 DUSP6Q16828 381 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 C1orf94Q6P1W5 598 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 NKAIN4Q8IVV8 208 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 CBARPQ8N350 705 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 TBC1D19Q8N5T2 526 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ARL14EPQ8N8R7 260 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 RELL2Q8NC24 303 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 OR10H4Q8NGA5 316 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 OR52B4Q8NGK2 314 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 NEURL3Q96EH8 262 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 RIOK2Q9BVS4 552 aaKnown RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 MYNNQ9NPC7 610 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 RPS6KB2Q9UBS0 482 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 RCE1Q9Y256 329 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ASB4Q9Y574 426 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 KCNE3Q9Y6H6 103 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 MYOFQ9NZM1 2061 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 KDM4EB2RXH2 506 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ARPC1BO15143 372 aaKnown RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 NDUFA2O43678 99 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 IGSF6O95976 241 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ANXA7P20073 488 aaKnown RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 RBMS1P29558 406 aaKnown RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 RFX3P48380 749 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ZNF33BQ06732 778 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 LMAN2Q12907 356 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 TFAP2EQ6VUC0 442 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 DCAF4L2Q8NA75 395 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 TTYH1Q9H313 450 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 MTG2Q9H4K7 406 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 CWH43Q9H720 699 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 SIRT3Q9NTG7 399 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 SEMA4GQ9NTN9 838 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 WSB2Q9NYS7 404 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 CXXC1Q9P0U4 656 aaPredicted RBP10.96□□□□□ -0.66
CPSF3-202ENST00000460593 ACAD8Q9UKU7 415 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 LIPT1Q9Y234 373 aa10.96□□□□□ -0.66
CPSF3-202ENST00000460593 A0A0G2JK05 382 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 A0A1W2PS29 197 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 CHRM4P08173 479 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 PTBP1P26599 531 aaKnown RBP eCLIP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 CCND3P30281 292 aaPredicted RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 TAS2R41P59536 307 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 AADACL4Q5VUY2 407 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 CST9Q5W186 159 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 TXNDC8Q6A555 127 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 CPXM2Q8N436 756 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 RASGEF1AQ8N9B8 481 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 POGLUT1Q8NBL1 392 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 OR2AP1Q8NGE2 309 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 OR56A3Q8NH54 315 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 BCL7CQ8WUZ0 217 aaPredicted RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 CHFRQ96EP1 664 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 ALG8Q9BVK2 526 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 KLF16Q9BXK1 252 aaPredicted RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 A4GALTQ9NPC4 353 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 TEX10Q9NXF1 929 aaPredicted RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 ZNF69Q9UC07 566 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 CASC3O15234 703 aaKnown RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 CATP04040 527 aaKnown RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 RB1P06400 928 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 HMGA1P17096 107 aaKnown RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 TRHRP34981 398 aaPredicted RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 MMP12P39900 470 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 HCCSP53701 268 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 DEFA5Q01523 94 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 PYHIN1Q6K0P9 492 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 OR11G2Q8NGC1 345 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 AUTS2Q8WXX7 1259 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 PLD4Q96BZ4 506 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 OR1F2PQ96R84 312 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 UBL7Q96S82 380 aaPredicted RBP10.95□□□□□ -0.66
CPSF3-202ENST00000460593 ZNF607Q96SK3 696 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 TIMP4Q99727 224 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 DPH7Q9BTV6 452 aa10.95□□□□□ -0.66
CPSF3-202ENST00000460593 EQTNQ9NQ60 294 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms