RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TRIM69Q86WT6 500 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 METTL27Q8N6F8 245 aaPredicted RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 OR4M2Q8NGB6 313 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 FAM46AQ96IP4 442 aaKnown RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 MRPL39Q9NYK5 338 aaKnown RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 WDR45Q9Y484 360 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 MAP1BP46821 2468 aaKnown RBP14.44□□□□□ -0.1
LMNB1-203ENST00000460265 SERTM1A2A2V5 107 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 B4DGG1 531 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 NTN1O95631 604 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 PDE7AQ13946 482 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 MFSD13AQ14CX5 517 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 ABHD17CQ6PCB6 329 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 HSDL2Q6YN16 418 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 FAM92BQ6ZTR7 304 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 ASPGQ86U10 573 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 DENND6BQ8NEG7 585 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 GPR32P1Q8NGA4 272 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 MS4A6EQ96DS6 147 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 CNRIP1Q96F85 164 aaPredicted RBP14.44□□□□□ -0.1
LMNB1-203ENST00000460265 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 EGLN3Q9H6Z9 239 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 ABCB9Q9NP78 766 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 DZANK1Q9NVP4 752 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 ZNF226Q9NYT6 803 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 KLHL21Q9UJP4 597 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 NPIPB8E9PQR5 432 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 B3GALT2O43825 422 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 FCMRO60667 390 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 OSMP13725 252 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 HOXB9P17482 250 aaPredicted RBP14.44□□□□□ -0.1
LMNB1-203ENST00000460265 EVI2BP34910 448 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 CBX5P45973 191 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 VSX2P58304 361 aaPredicted RBP14.44□□□□□ -0.1
LMNB1-203ENST00000460265 RAB14P61106 215 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 ZBTB37Q5TC79 503 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 APH1BQ8WW43 257 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 FBXW5Q969U6 566 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 MCHR1Q99705 422 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 TBC1D17Q9HA65 648 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 MCUBQ9NWR8 336 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 CYP8B1Q9UNU6 501 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 MGAT4BQ9UQ53 548 aa14.44□□□□□ -0.1
LMNB1-203ENST00000460265 SAGP10523 405 aaPredicted RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 ELAVL4P26378 380 aaKnown RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 RGS6P49758 472 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 AKR1D1P51857 326 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TIMM50Q3ZCQ8 353 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 CFAP77Q6ZQR2 320 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SFTPA2Q8IWL1 248 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SLC16A11Q8NCK7 471 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 ST8SIA2Q92186 375 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TRAF4Q9BUZ4 470 aaPredicted RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TEX101Q9BY14 249 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 GABARAPL1Q9H0R8 117 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 PPA2Q9H2U2 334 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 C6orf106Q9H6K1 298 aaPredicted RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 IL21RQ9HBE5 538 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 HCN2Q9UL51 889 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SLC35F4A4IF30 521 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 BET1O15155 118 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 IFNGR2P38484 337 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TNK1Q13470 666 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 IGSF11Q5DX21 431 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SLC30A6Q6NXT4 461 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 CDC73Q6P1J9 531 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 PAQR6Q6TCH4 344 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 PRSS42Q7Z5A4 293 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TSEN54Q7Z6J9 526 aaKnown RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SLC30A8Q8IWU4 369 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 LAX1Q8IWV1 398 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 MARVELD3Q96A59 401 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 DIRAS2Q96HU8 199 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SLC38A2Q96QD8 506 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SLC6A20Q9NP91 592 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 A0A1W2PPV9 198 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 FABP12A6NFH5 140 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 GKN3PP0CG01 181 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 INPP1P49441 399 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TMEM35AQ53FP2 167 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 SAXO2Q658L1 398 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 UBE3DQ7Z6J8 389 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 COX18Q8N8Q8 333 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 IL17RCQ8NAC3 791 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 C19orf18Q8NEA5 215 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 OR4K14Q8NGD5 310 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 OR2L8Q8NGY9 312 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 GOT1L1Q8NHS2 421 aaPredicted RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 GRHL3Q8TE85 626 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 GIMAP1Q8WWP7 306 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 WDR34Q96EX3 536 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TRMT61AQ96FX7 289 aaKnown RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 APOBEC3BQ9UH17 382 aaKnown RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 NDOR1Q9UHB4 597 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 MRPS7Q9Y2R9 242 aaKnown RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 RPL36Q9Y3U8 105 aaKnown RBP14.43□□□□□ -0.1
LMNB1-203ENST00000460265 TRIOO75962 3097 aa14.43□□□□□ -0.1
LMNB1-203ENST00000460265 FAM240BA0A1B0GVZ2 78 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 URADA6NGE7 173 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 FAAHO00519 579 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms