RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CGB2Q6NT52 195 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 GALNT10Q86SR1 603 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 MARVELD2Q8N4S9 558 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 OR2M3Q8NG83 312 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 OR4C3Q8NH37 302 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 RFWD2Q8NHY2 731 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 SARAFQ96BY9 339 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 DTNBP1Q96EV8 351 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 PANX1Q96RD7 426 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 VKORC1Q9BQB6 163 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 SLC35A5Q9BS91 424 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 PRDM14Q9GZV8 571 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF350Q9GZX5 532 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 TP63Q9H3D4 680 aaPredicted RBP12.89□□□□□ -0.35
HDAC4-205ENST00000454542 SLC52A3Q9NQ40 469 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 SLC6A13Q9NSD5 602 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 PPP4R1LQ9P1A2 415 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 SH3BGRL2Q9UJC5 107 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
HDAC4-205ENST00000454542 FREM3P0C091 2139 aa12.89□□□□□ -0.35
HDAC4-205ENST00000454542 CCDC154A6NI56 674 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 DUXAA6NLW8 204 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 NPIPA2E9PIF3 369 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 NPIPA3F8WFD2 350 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 CCL21O00585 134 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 ZG16O60844 167 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 ANGPTL1O95841 491 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 MATN1P21941 496 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 MAGEA8P43361 318 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 TRPC1P48995 793 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 KHKP50053 298 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 MVDP53602 400 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 GFRA1P56159 465 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 STX1BP61266 288 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 SQLEQ14534 574 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 GANABQ14697 944 aaKnown RBP12.88□□□□□ -0.35
HDAC4-205ENST00000454542 EIPR1Q53HC9 387 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 DCST1Q5T197 706 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 VASNQ6EMK4 673 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 BLOC1S3Q6QNY0 202 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 RPTNQ6XPR3 784 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 MARCH3Q86UD3 253 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 EID3Q8N140 333 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 TRIML2Q8N7C3 387 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 ZFP90Q8TF47 636 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 ITLN2Q8WWU7 325 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-205ENST00000454542 SDF2Q99470 211 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 TBL1XR1Q9BZK7 514 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 OR51I1Q9H343 314 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 LDAHQ9H6V9 325 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 HHATLQ9HCP6 504 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 NPHS2Q9NP85 383 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 UBQLN4Q9NRR5 601 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 PNPLA3Q9NST1 481 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 SUCOQ9UBS9 1254 aaKnown RBP12.88□□□□□ -0.35
HDAC4-205ENST00000454542 FAM215AQ9Y5M1 114 aa12.88□□□□□ -0.35
HDAC4-205ENST00000454542 DIDO1Q9BTC0 2240 aaKnown RBP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 PRAMEF27A3QJZ7 478 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 FIGNL2A6NMB9 653 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 RFXANKO14593 260 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 KIAA0513O60268 411 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 WDR1O75083 606 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 AGR2O95994 175 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 CAPN3P20807 821 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 AGAP20933 346 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 DCTP40126 519 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 CLK3P49761 638 aaKnown RBP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 DSCR4P56555 118 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 B3GALT5-AS1P59052 145 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 GUCY1A3Q02108 690 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 C17orf67Q0P5P2 114 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 CD226Q15762 336 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 ARHGAP11BQ3KRB8 267 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 WIPI1Q5MNZ9 446 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 RTL6Q6ICC9 239 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 DNAJC14Q6Y2X3 702 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 YRDCQ86U90 279 aaKnown RBP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 MISPQ8IVT2 679 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-205ENST00000454542 OR4K17Q8NGC6 315 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 OIT3Q8WWZ8 545 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 GTF2H4Q92759 462 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 CHMP6Q96FZ7 201 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 UGT2B28Q9BY64 529 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 RMND5AQ9H871 391 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 SDHAF3Q9NRP4 125 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
HDAC4-205ENST00000454542 HMGN4O00479 90 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 ZIC3O60481 467 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 TRAPPC6AO75865 159 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 ACTL6AO96019 429 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 OR12D1P0DN82 309 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 BMP7P18075 431 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 ATP6V1C1P21283 382 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms