RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 C17orf67Q0P5P2 114 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 DUSP5Q16690 384 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 AGKQ53H12 422 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 FNDC7Q5VTL7 733 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 ENPP6Q6UWR7 440 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 CPLX4Q7Z7G2 160 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 IFNEQ86WN2 208 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 ZNF527Q8NB42 609 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 FAM83FQ8NEG4 500 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-204ENST00000447376 OR9I1Q8NGQ6 314 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 GOT1L1Q8NHS2 421 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-204ENST00000447376 HOXB13Q92826 284 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-204ENST00000447376 C16orf58Q96GQ5 468 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 PNPLA3Q9NST1 481 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 EXD2Q9NVH0 621 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 NINQ8N4C6 2090 aa14.93□□□□□ -0.02
SF3A1-204ENST00000447376 USP9XQ93008 2570 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-204ENST00000447376 GMNCA6NCL1 334 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 H3BNH8 94 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 NDUFB5O43674 189 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 FADS1O60427 444 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 ANP32DO95626 131 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 ACTL6AO96019 429 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 AK1P00568 194 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 SRD5A2P31213 254 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 MAP3K8P41279 467 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 DSCR4P56555 118 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-204ENST00000447376 GNGT1P63211 74 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 STX5Q13190 355 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 RCAN2Q14206 197 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 GANABQ14697 944 aaKnown RBP14.92□□□□□ -0.02
SF3A1-204ENST00000447376 TIGD2Q4W5G0 525 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 WIPI1Q5MNZ9 446 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-204ENST00000447376 ATAD3BQ5T9A4 648 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 CGB2Q6NT52 195 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 AAGABQ6PD74 315 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 FIGNL1Q6PIW4 674 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 BLOC1S3Q6QNY0 202 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 B3GNT6Q6ZMB0 384 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 ZNF621Q6ZSS3 439 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 C6orf120Q7Z4R8 191 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 MISPQ8IVT2 679 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 WDSUB1Q8N9V3 476 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 ASB5Q8WWX0 329 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 RND1Q92730 232 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 CDS1Q92903 461 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 ABTB1Q969K4 478 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-204ENST00000447376 SPDL1Q96EA4 605 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 HOXD1Q9GZZ0 328 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 UBQLN4Q9NRR5 601 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 TAS2R10Q9NYW0 307 aa14.92□□□□□ -0.02
SF3A1-204ENST00000447376 DOPEY2Q9Y3R5 2298 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 NR5A2O00482 541 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 ANGPTL1O95841 491 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 NGFRP08138 427 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 RNF224P0DH78 156 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 MATN1P21941 496 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 DPP4P27487 766 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 GYS2P54840 703 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 TXNL4AP83876 142 aaKnown RBP14.91□□□□□ -0.02
SF3A1-204ENST00000447376 SF3A3Q12874 501 aaKnown RBP eCLIP14.91□□□□□ -0.02
SF3A1-204ENST00000447376 GRAMD1BQ3KR37 738 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 EIPR1Q53HC9 387 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 C6orf10Q5SRN2 563 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 DCST2Q5T1A1 773 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 OR5M10Q6IEU7 315 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 C16orf62Q7Z3J2 963 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 GALNT10Q86SR1 603 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 YRDCQ86U90 279 aaKnown RBP14.91□□□□□ -0.02
SF3A1-204ENST00000447376 OR10Q1Q8NGQ4 319 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 CA5BP1Q8WTZ4 195 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 RNF138Q8WVD3 245 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 ITLN2Q8WWU7 325 aaPredicted RBP14.91□□□□□ -0.02
SF3A1-204ENST00000447376 OTUB1Q96FW1 271 aaPredicted RBP14.91□□□□□ -0.02
SF3A1-204ENST00000447376 SLC35A5Q9BS91 424 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 OR2B2Q9GZK3 357 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 GPATCH2Q9NW75 528 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 SPRR3Q9UBC9 169 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 TNFRSF10DQ9UBN6 386 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 CAMK2AQ9UQM7 478 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 SLC6A5Q9Y345 797 aa14.91□□□□□ -0.02
SF3A1-204ENST00000447376 MRPS18CQ9Y3D5 142 aaKnown RBP14.91□□□□□ -0.02
SF3A1-204ENST00000447376 GTF3C1Q12789 2109 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 AHRRA9YTQ3 701 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 KRT75O95678 551 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 OXSR1O95747 527 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-204ENST00000447376 TBXA2RP21731 343 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 KHKP50053 298 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 SEC24CP53992 1094 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 HPCAP84074 193 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 ART3Q13508 389 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 FLYWCH1Q4VC44 716 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 NHSL2Q5HYW2 709 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 C1orf185Q5T7R7 199 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 SPATA21Q7Z572 469 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 MARCH3Q86UD3 253 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 FUNDC1Q8IVP5 155 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 FAM110BQ8TC76 370 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 DUSP19Q8WTR2 217 aa14.9□□□□□ -0.02
SF3A1-204ENST00000447376 TSPEARQ8WU66 669 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms