RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 GCM2O75603 506 aaPredicted RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 NR2F1P10589 423 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PCBP3P57721 371 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 BTG2P78543 158 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 IGLV3-21P80748 117 aaPredicted RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MRPS15P82914 257 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 BAMBIQ13145 260 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 DNASE1L3Q13609 305 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MFSD13AQ14CX5 517 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 NKG7Q16617 165 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PRICKLE4Q2TBC4 344 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 TRMT12Q53H54 448 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CYBRD1Q53TN4 286 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ARHGAP40Q5TG30 622 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 C1orf189Q5VU69 101 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 HMBOX1Q6NT76 420 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 RHBDD2Q6NTF9 364 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CADM2Q8N3J6 435 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 AGBL5Q8NDL9 886 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 OR10Q1Q8NGQ4 319 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ADAMTS15Q8TE58 950 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 C16orf58Q96GQ5 468 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM19Q96HH6 336 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM246Q9BRR3 403 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 BDH2Q9BUT1 245 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ALOXE3Q9BYJ1 711 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 NTN4Q9HB63 628 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM9BQ9NQ34 198 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PPP1R14DQ9NXH3 145 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SIDT1Q9NXL6 827 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MAT2BQ9NZL9 334 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PCP4L1A6NKN8 68 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PTP4A3O75365 173 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PDE9AO76083 593 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 KCNK2O95069 426 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SFTPCP11686 197 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CD59P13987 128 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SPEM2Q0P670 501 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 BIKQ13323 160 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SERTAD2Q14140 314 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ATP6AP1Q15904 470 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CRB2Q5IJ48 1285 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 TOR2AQ5JU69 321 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 GPR107Q5VW38 600 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MFSD12Q6NUT3 480 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MED25Q71SY5 747 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SPATC1Q76KD6 591 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PPP1R3BQ86XI6 285 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 GALNT12Q8IXK2 581 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 LGI4Q8N135 537 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 VWA5B2Q8N398 1253 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 OTUB1Q96FW1 271 aaPredicted RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 TPD52L3Q96J77 140 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 HSH2DQ96JZ2 352 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 DGAT2Q96PD7 388 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PELOQ9BRX2 385 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ADAP2Q9NPF8 381 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MBD2Q9UBB5 411 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF221Q9UK13 617 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MMACHCQ9Y4U1 282 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 LEUTXA8MZ59 168 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SCRG1O75711 98 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 AGR2O95994 175 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 OPN1SWP03999 348 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ATF4P18848 351 aaPredicted RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MAOAP21397 527 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 UGT2B10P36537 528 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CRYBA2P53672 197 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CRISP3P54108 245 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SELENOWP63302 87 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ZFP36L1Q07352 338 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MAP4K2Q12851 820 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SYPL1Q16563 259 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 Q3ZCU0 254 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 MINDY4Q4G0A6 757 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 FAM209BQ5JX69 171 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ATAD3CQ5T2N8 411 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 FHL5Q5TD97 284 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CDC73Q6P1J9 531 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 B3GNT8Q7Z7M8 397 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SLC22A16Q86VW1 577 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 NAXDQ8IW45 347 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 ANKFN1Q8N957 763 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 DOK4Q8TEW6 326 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 RIT1Q92963 219 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CTHRC1Q96CG8 243 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 PTCHD1Q96NR3 888 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 OR7D2Q96RA2 312 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 DOHHQ9BU89 302 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 NAA50Q9GZZ1 169 aaKnown RBP7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SDHAF3Q9NRP4 125 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 LANCL2Q9NS86 450 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 SEMA4GQ9NTN9 838 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 EXD2Q9NVH0 621 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 BAG5Q9UL15 447 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 LIPT1Q9Y234 373 aa7.53□□□□□ -1.2
CCDC39-201ENST00000442201 CAB39Q9Y376 341 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 335.2 ms