RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ASB4Q9Y574 426 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ARHGAP21Q5T5U3 1957 aa4.4□□□□□ -1.7
PTPN4-206ENST00000441089 A0A0A6YYC8 382 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 A0A1W2PR48 441 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 A0A1W2PS29 197 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 FAM234BA2RU67 622 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF860A6NHJ4 632 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 GABRR3A8MPY1 467 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TMEM150CB9EJG8 249 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 FAM227AF5H4B4 570 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 I3L1I5 382 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SGK494L7N484 410 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CLDN4O14493 209 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SCAMP2O15127 329 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 PGRMC2O15173 223 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SRPX2O60687 465 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 GALR3O60755 368 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 MYO1DO94832 1006 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 GOSR1O95249 250 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 C1QCP02747 245 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 IL3P08700 152 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 FAM58BPP0C7Q3 252 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 LAMP1P11279 417 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 HOXB9P17482 250 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ALOX12P18054 663 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 IL1RNP18510 177 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ITGAXP20702 1163 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 EFNA1P20827 205 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 HIST1H1TP22492 207 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CALB2P22676 271 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CPOXP36551 454 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CDKN2CP42773 168 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SSR2P43308 183 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 POLR2JP52435 117 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 HNRNPFP52597 415 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 MAPK12P53778 367 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 STXBP1P61764 594 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 OLR1P78380 273 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 IRX1P78414 480 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 DCDP81605 110 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SLC25A3Q00325 362 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ALDH6A1Q02252 535 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 KLC1Q07866 573 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 RGS1Q08116 209 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF763Q0D2J5 394 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 HNRNPA0Q13151 305 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SLAMF1Q13291 335 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CYLC2Q14093 348 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 RPS6KA2Q15349 733 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 MUM1Q2TAK8 710 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 KRTAP24-1Q3LI83 254 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 FAM174BQ3ZCQ3 159 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CHRFAM7AQ494W8 412 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 GTDC1Q4AE62 458 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 DEFB134Q4QY38 66 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TIGD2Q4W5G0 525 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CCNYL2Q5T2Q4 361 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 C18orf63Q68DL7 685 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 REP15Q6BDI9 236 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 OR4F3Q6IEY1 312 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 HEPHL1Q6MZM0 1159 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 FAM180BQ6P0A1 224 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 C8orf82Q6P1X6 216 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TRIM40Q6P9F5 258 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SLC2A7Q6PXP3 512 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ARSKQ6UWY0 536 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CCDC121Q6ZUS5 278 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF771Q7L3S4 317 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 YTHDF3Q7Z739 585 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 NUDT13Q86X67 352 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 MSRB3Q8IXL7 192 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 GPR135Q8IZ08 494 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CA13Q8N1Q1 262 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ZCCHC7Q8N3Z6 543 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 KIF2BQ8N4N8 673 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TBC1D19Q8N5T2 526 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ACOT4Q8N9L9 421 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CAMKVQ8NCB2 501 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 RBM15BQ8NDT2 890 aaKnown RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 OR5T3Q8NGG3 340 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CDC26Q8NHZ8 85 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 RERGQ96A58 199 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 RGMAQ96B86 450 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TESCQ96BS2 214 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 COQ8BQ96D53 544 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SPDL1Q96EA4 605 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 LCORQ96JN0 433 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-206ENST00000441089 CSF3RQ99062 836 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 MAPKAP1Q9BPZ7 522 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TBCDQ9BTW9 1192 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 UCK2Q9BZX2 261 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 DPY30Q9C005 99 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 MYNNQ9NPC7 610 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SERHLQ9NQF3 203 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SLC6A13Q9NSD5 602 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 NMRK1Q9NWW6 199 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TAS2R1Q9NYW7 299 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 KCMF1Q9P0J7 381 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ASH2LQ9UBL3 628 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms