RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 HMGN1P05114 100 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 TPOP07202 933 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 NDUFV2P19404 249 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 AHCYP23526 432 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 LIMS1P48059 325 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 EEF1A2Q05639 463 aaKnown RBP8.49□□□□□ -1.05
COPB1-202ENST00000439561 CAMK1Q14012 370 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 HYAL4Q2M3T9 481 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 SLC25A35Q3KQZ1 300 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 HES5Q5TA89 166 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 HBMQ6B0K9 141 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 FAAP20Q6NZ36 180 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 ZNF322Q6U7Q0 402 aaPredicted RBP8.49□□□□□ -1.05
COPB1-202ENST00000439561 CAMKMTQ7Z624 323 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 LINC00471Q8N535 108 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 FAM98AQ8NCA5 519 aaKnown RBP8.49□□□□□ -1.05
COPB1-202ENST00000439561 GRHL3Q8TE85 626 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 TNFAIP8L1Q8WVP5 186 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 ST8SIA2Q92186 375 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 RGMAQ96B86 450 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 CASD1Q96PB1 797 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 OR2M2Q96R28 347 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 SEC22CQ9BRL7 303 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 MED18Q9BUE0 208 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 GSX2Q9BZM3 304 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 MS4A7Q9GZW8 240 aaPredicted RBP8.49□□□□□ -1.05
COPB1-202ENST00000439561 WDR90Q96KV7 1748 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 ANKRD36A6QL64 1941 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 LEFTY2O00292 366 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FLRT2O43155 660 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CFDP00746 253 aaPredicted RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 CYBAP13498 195 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ZNF30P17039 623 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SLC6A1P30531 599 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 OPRD1P41143 372 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CLDN12P56749 244 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 PITPNAQ00169 270 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 OPCMLQ14982 345 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 NDUFAF6Q330K2 333 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TP53I3Q53FA7 332 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ACSM3Q53FZ2 586 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TCTE1Q5JU00 501 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 C3P1Q6ZMU1 363 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TMEM99Q8N816 258 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FIBINQ8TAL6 211 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 OVCA2Q8WZ82 227 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TM4SF18Q96CE8 201 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 C4orf36Q96KX1 117 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CAMK1GQ96NX5 476 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FERD3LQ96RJ6 166 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 EMC7Q9NPA0 242 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 A4GALTQ9NPC4 353 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 HINT3Q9NQE9 182 aaKnown RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 PRKAG2Q9UGJ0 569 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ASB4Q9Y574 426 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 INSL5Q9Y5Q6 135 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 UBE2QL1A1L167 161 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ARRDC5A6NEK1 342 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SGK494L7N484 410 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FOXE1O00358 373 aaPredicted RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 GPR171O14626 319 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CCL16O15467 120 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 LATO43561 262 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SELPP16109 830 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CFL1P23528 166 aaKnown RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 MAPK9P45984 424 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CCR8P51685 355 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 MAP2K6P52564 334 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 BTG1P62324 171 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 PRR5P85299 388 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 PGGHGQ32M88 737 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FAM122CQ6P4D5 195 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 MTSS1LQ765P7 747 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 RAB42Q8N4Z0 105 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 MS4A15Q8N5U1 240 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 GOT1L1Q8NHS2 421 aaPredicted RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 SUN3Q8TAQ9 357 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FANK1Q8TC84 345 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TMEM255BQ8WV15 326 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ZNF689Q96CS4 500 aaPredicted RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 ORAI1Q96D31 301 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ZG16BQ96DA0 208 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FCRL1Q96LA6 429 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SFXN2Q96NB2 322 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 C1QTNF7Q9BXJ2 289 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SLC25A18Q9H1K4 315 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 AUNIPQ9H7T9 357 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SEMA4GQ9NTN9 838 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 WSB2Q9NYS7 404 aaPredicted RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 KCND3Q9UK17 655 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 PLXNB2O15031 1838 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 RIIAD1A6NNX1 92 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TDRD15B5MCY1 1934 aaKnown RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 TMPRSS11DO60235 418 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CHRM4P08173 479 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 LAMP2P13473 410 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 HK1P19367 917 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 GRPRP30550 384 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FGF9P31371 208 aaPredicted RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 ID2Q02363 134 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms