RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CHRM4P08173 479 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 RHCEP18577 417 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 CARD18P57730 90 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 PRPS1P60891 318 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 ADAM17P78536 824 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 PSD4Q8NDX1 1056 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 PATE1Q8WXA2 126 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 FAM122AQ96E09 287 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 FAM71F1Q96KD3 344 aaPredicted RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 URM1Q9BTM9 101 aaKnown RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 BTBD2Q9BX70 525 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 MYH3P11055 1940 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 LOC102725191A0A1B0GVB3 256 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 METTL12A8MUP2 240 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 TIMM8AO60220 97 aaPredicted RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 RAC2P15153 192 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 S100A10P60903 97 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 TMEM64Q6YI46 380 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 CHCHD4Q8N4Q1 142 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 OR11L1Q8NGX0 322 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 RSC1A1Q92681 617 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 HDHD5Q9BXW7 423 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 MKRN2Q9H000 416 aaKnown RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 TRPV4Q9HBA0 871 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 FOLH1BQ9HBA9 442 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 GPR83Q9NYM4 423 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 CARD8Q9Y2G2 431 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 ZNF451Q9Y4E5 1061 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 HHLA1C9JL84 531 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 PHYHO14832 338 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 KLF11O14901 512 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 FUT1P19526 365 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 VAMP1P23763 118 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 DCKP27707 260 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 ACTC1P68032 377 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 ACTA1P68133 377 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 VWA2Q5GFL6 755 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 ASB11Q8WXH4 323 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 SENP5Q96HI0 755 aaPredicted RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 BARD1Q99728 777 aaKnown RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 DPH1Q9BZG8 443 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 WDR12Q9GZL7 423 aaKnown RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 KATNBL1Q9H079 304 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 IL37Q9NZH6 218 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 HTR3BO95264 441 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 AIFM1O95831 613 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 CD36P16671 472 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 MAOAP21397 527 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 CCL7P80098 99 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 SIGLEC14Q08ET2 396 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 POU4F2Q12837 409 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 AAED1Q7RTV5 226 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 PGBD5Q8N414 524 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 CHTF18Q8WVB6 975 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 FKBP10Q96AY3 582 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 REV1Q9UBZ9 1251 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 KDELR2P33947 212 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 TNFRSF17Q02223 184 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 DNASE1L3Q13609 305 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 MEDAGQ5VYS4 303 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 NIPAL3Q6P499 406 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 SYCE2Q6PIF2 218 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 L3HYPDHQ96EM0 354 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 ZNF845Q96IR2 970 aaPredicted RBP11.36□□□□□ -0.59
NEK1-201ENST00000439128 VRK1Q99986 396 aaPredicted RBP11.36□□□□□ -0.59
NEK1-201ENST00000439128 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 ABRACLQ9P1F3 81 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 ZNF850A8MQ14 1090 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 K7ESM1 405 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 FRS3O43559 492 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 SYT7O43581 403 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 F8A1P23610 371 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 TPTEP56180 551 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 KIAA1614Q5VZ46 1190 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 GFRALQ6UXV0 394 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 RPS19BP1Q86WX3 136 aaKnown RBP11.36□□□□□ -0.59
NEK1-201ENST00000439128 TSPAN10Q9H1Z9 355 aaPredicted RBP11.36□□□□□ -0.59
NEK1-201ENST00000439128 PRDM9Q9NQV7 894 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 USP36Q9P275 1121 aaKnown RBP11.36□□□□□ -0.59
NEK1-201ENST00000439128 PEX16Q9Y5Y5 336 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 GPR85P60893 370 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 TRA2BP62995 288 aaKnown RBP11.36□□□□□ -0.59
NEK1-201ENST00000439128 HBMQ6B0K9 141 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 SHFQ7M4L6 423 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 PAQR7Q86WK9 346 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 STX12Q86Y82 276 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 CCDC107Q8WV48 283 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 S100A16Q96FQ6 103 aaKnown RBP11.36□□□□□ -0.59
NEK1-201ENST00000439128 INPP5KQ9BT40 448 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 ATG5Q9H1Y0 275 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 MED28Q9H204 178 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 OR10A5Q9H207 317 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 TBC1D29Q9UFV1 150 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 ZNF175Q9Y473 711 aa11.36□□□□□ -0.59
NEK1-201ENST00000439128 SMIM30A4D0T7 59 aa11.35□□□□□ -0.59
NEK1-201ENST00000439128 M0R3H8 397 aa11.35□□□□□ -0.59
NEK1-201ENST00000439128 MT-CO3P00414 261 aa11.35□□□□□ -0.59
NEK1-201ENST00000439128 AQP4P55087 323 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms