RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PRR5P85299 388 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 GANABQ14697 944 aaKnown RBP13.96□□□□□ -0.17
SEC13-210ENST00000428626 PCLAFQ15004 111 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 PON3Q15166 354 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 RFTN2Q52LD8 501 aaPredicted RBP13.96□□□□□ -0.17
SEC13-210ENST00000428626 CFAP157Q5JU67 520 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 TDRPQ86YL5 185 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 C10orf107Q8IVU9 208 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 C4orf33Q8N1A6 199 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 MEIOBQ8N635 442 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 OR4C3Q8NH37 302 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 CLHC1Q8NHS4 586 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 OTUB1Q96FW1 271 aaPredicted RBP13.96□□□□□ -0.17
SEC13-210ENST00000428626 MARK4Q96L34 752 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 TSSK3Q96PN8 268 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 PIGQQ9BRB3 760 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 LRTM1Q9HBL6 345 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 SDHAF3Q9NRP4 125 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 C1orf109Q9NX04 203 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 EDARQ9UNE0 448 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 FIS1Q9Y3D6 152 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 HEATR5AQ86XA9 2040 aa13.96□□□□□ -0.17
SEC13-210ENST00000428626 NUP214P35658 2090 aaPredicted RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 FN1P02751 2386 aaKnown RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 TMEM233B4DJY2 109 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 H3BQF6 201 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 PDPK1O15530 556 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 IFI6P09912 130 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 PRPS2P11908 318 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 KRT4P19013 534 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 LOXP28300 417 aaPredicted RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 CD79BP40259 229 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 FRKP42685 505 aaPredicted RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 CCT5P48643 541 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 NAA20P61599 178 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 SLC18A2Q05940 514 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 PDE7AQ13946 482 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 ZNHIT3Q15649 155 aaPredicted RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 EXOSC6Q5RKV6 272 aaKnown RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 LIPMQ5VYY2 423 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 OR2A2Q6IF42 318 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 ZNF550Q7Z398 422 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 METTL25Q8N6Q8 603 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 ZNF610Q8N9Z0 462 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 GATSQ8NAP1 163 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 SLC16A11Q8NCK7 471 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 UBLCP1Q8WVY7 318 aaPredicted RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 SLC9A6Q92581 669 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 DTNBP1Q96EV8 351 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 C16orf58Q96GQ5 468 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 ZNF764Q96H86 408 aaPredicted RBP13.95□□□□□ -0.18
SEC13-210ENST00000428626 HS3ST6Q96QI5 342 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 PTGES2Q9H7Z7 377 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 NTMQ9P121 344 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 GIMAP2Q9UG22 337 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 ZNF175Q9Y473 711 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 DNAJC15Q9Y5T4 150 aa13.95□□□□□ -0.18
SEC13-210ENST00000428626 RAI1Q7Z5J4 1906 aaPredicted RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 ALG1L2C9J202 215 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 COPEO14579 308 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 AZIN1O14977 448 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 LSM1O15116 133 aaKnown RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 EMC8O43402 210 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 TBX19O60806 448 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 OXSR1O95747 527 aaPredicted RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 OPN1LWP04000 364 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 CHRNGP07510 517 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 LINC00032P0C843 101 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 FOSL1P15407 271 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 UGT2B10P36537 528 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 PCYT1AP49585 367 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 PRKAG1P54619 331 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 RPL38P63173 70 aaKnown RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 EEF1A1P68104 462 aaKnown RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 C17orf67Q0P5P2 114 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 DUSP5Q16690 384 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 CTU2Q2VPK5 515 aaKnown RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 UGT3A2Q3SY77 523 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 GLYR1Q49A26 553 aaPredicted RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 EEF1A1P5Q5VTE0 462 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 KANK2Q63ZY3 851 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 FIGNL1Q6PIW4 674 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 CHMP1BQ7LBR1 199 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 CCDC63Q8NA47 563 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 NUP43Q8NFH3 380 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 FAM110BQ8TC76 370 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 GPR151Q8TDV0 419 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 NUDT8Q8WV74 236 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 METTL2AQ96IZ6 378 aaKnown RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 ADGRG7Q96K78 797 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 CCT7Q99832 543 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 TBL1XR1Q9BZK7 514 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 REEP4Q9H6H4 257 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 SIRT3Q9NTG7 399 aaPredicted RBP13.94□□□□□ -0.18
SEC13-210ENST00000428626 NDRG3Q9UGV2 375 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 VDAC3Q9Y277 283 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
SEC13-210ENST00000428626 LINC01387J3KSC0 135 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 SLC28A1O00337 649 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms