RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CLOCKO15516 846 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 GPRIN2O60269 458 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 COQ9O75208 318 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 GCM2O75603 506 aaPredicted RBP9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 PSMG1O95456 288 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 CD8AP01732 235 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 CD3EP07766 207 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 IL3P08700 152 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 RPS17P08708 135 aaKnown RBP9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 ADH6P28332 368 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 FAPQ12884 760 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 CALCOCO2Q13137 446 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 TAB1Q15750 504 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 TMEM249Q2WGJ8 235 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 LGSNQ5TDP6 509 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 MROH9Q5TGP6 573 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 FAM219BQ5XKK7 198 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 PPP4R4Q6NUP7 873 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 FIGNL1Q6PIW4 674 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 GALNT10Q86SR1 603 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 MARCH3Q86UD3 253 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 DTX2Q86UW9 622 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 FAM9CQ8IZT9 166 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 KBTBD8Q8NFY9 601 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 FBF1Q8TES7 1133 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 DUSP19Q8WTR2 217 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 SELENOMQ8WWX9 145 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 EXOSC8Q96B26 276 aaKnown RBP9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 PHF21BQ96EK2 531 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 HS6ST2Q96MM7 605 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 HBEGFQ99075 208 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 TRIM2Q9C040 744 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 DPH5Q9H2P9 285 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 ESRP2Q9H6T0 727 aaKnown RBP9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 MCM8Q9UJA3 840 aa9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 GDF2Q9UK05 429 aaPredicted RBP9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 MCTS1Q9ULC4 181 aaKnown RBP9.09□□□□□ -0.95
TNFAIP3-202ENST00000420009 A0A087WV62 115 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 C7orf72A4D263 438 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 PPP6CO00743 305 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 CXCL13O43927 109 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 ESRRBO95718 433 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 IL33O95760 270 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 OTCP00480 354 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 TUBBP07437 444 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 PSMA4P25789 261 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 THBS2P35442 1172 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 SERPINB8P50452 374 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 RAE1P78406 368 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 MRPS25P82663 173 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 PRR5P85299 388 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 VLDLRP98155 873 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 C17orf67Q0P5P2 114 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 DECR1Q16698 335 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 SH2D4BQ5SQS7 431 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 MFSD12Q6NUT3 480 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 APOOLQ6UXV4 268 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 TFAP2EQ6VUC0 442 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 EXOC3L1Q86VI1 746 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 WDR75Q8IWA0 830 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 PLD6Q8N2A8 252 aaKnown RBP9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 GTPBP8Q8N3Z3 284 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 OR10H5Q8NGA6 315 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 OR2V1Q8NHB1 315 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 ZNF483Q8TF39 744 aaPredicted RBP9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 NPAS1Q99742 590 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 ERP44Q9BS26 406 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 C19orf24Q9BVV8 132 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 HDHD5Q9BXW7 423 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 SHCBP1LQ9BZQ2 653 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 AMBRA1Q9C0C7 1298 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 C12orf49Q9H741 205 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 NGBQ9NPG2 151 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 SLC35C2Q9NQQ7 365 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 GIMAP4Q9NUV9 329 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 NMRK1Q9NWW6 199 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 XPR1Q9UBH6 696 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 STOML1Q9UBI4 398 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 VPS29Q9UBQ0 182 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 ZNF225Q9UK10 706 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 TMCO1Q9UM00 188 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 SNX6Q9UNH7 406 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 VDAC3Q9Y277 283 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 SNX8Q9Y5X2 465 aa9.08□□□□□ -0.96
TNFAIP3-202ENST00000420009 A0A087WZY1 265 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 PCDH7O60245 1069 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 UTS2O95399 124 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 SYNGR4O95473 234 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 ANGPTL1O95841 491 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 HSD3B1P14060 373 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 CHN1P15882 459 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 HSD3B2P26439 372 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 MAGEA4P43358 317 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 MAGEA12P43365 314 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 CLK3P49761 638 aaKnown RBP9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 RAC1P63000 192 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 BSPH1Q075Z2 132 aa9.07□□□□□ -0.96
TNFAIP3-202ENST00000420009 LOXL1Q08397 574 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms