RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ACOT11Q8WXI4 607 aaPredicted RBP14.29□□□□□ -0.12
LRCH3-202ENST00000414675 SLC38A3Q99624 504 aa14.29□□□□□ -0.12
LRCH3-202ENST00000414675 IRAK4Q9NWZ3 460 aa14.29□□□□□ -0.12
LRCH3-202ENST00000414675 UCKL1Q9NWZ5 548 aa14.29□□□□□ -0.12
LRCH3-202ENST00000414675 OSGIN1Q9UJX0 560 aa14.29□□□□□ -0.12
LRCH3-202ENST00000414675 SLC7A7Q9UM01 511 aa14.29□□□□□ -0.12
LRCH3-202ENST00000414675 OR10H2O60403 315 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 SULT1C4O75897 302 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 ZNF155Q12901 538 aaPredicted RBP14.28□□□□□ -0.12
LRCH3-202ENST00000414675 WDR88Q6ZMY6 472 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 C17orf82Q86X59 251 aaPredicted RBP14.28□□□□□ -0.12
LRCH3-202ENST00000414675 METTL27Q8N6F8 245 aaPredicted RBP14.28□□□□□ -0.12
LRCH3-202ENST00000414675 POGLUT1Q8NBL1 392 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 ZHX1-C8orf76Q96EF9 292 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 VMP1Q96GC9 406 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 LRR1Q96L50 414 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 HSPA12BQ96MM6 686 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 ZNF582Q96NG8 517 aaPredicted RBP14.28□□□□□ -0.12
LRCH3-202ENST00000414675 MGLLQ99685 303 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 SLIRPQ9GZT3 109 aaKnown RBP14.28□□□□□ -0.12
LRCH3-202ENST00000414675 DCSTAMPQ9H295 470 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 LSM2Q9Y333 95 aaKnown RBP14.28□□□□□ -0.12
LRCH3-202ENST00000414675 PCDHGA3Q9Y5H0 932 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 CLDN16Q9Y5I7 305 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 MYO15AQ9UKN7 3530 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 CABIN1Q9Y6J0 2220 aa14.28□□□□□ -0.12
LRCH3-202ENST00000414675 IGHV5-51A0A0C4DH38 117 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 LILRA5A6NI73 299 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 KLF4O43474 513 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 DBIP07108 87 aaKnown RBP14.27□□□□□ -0.12
LRCH3-202ENST00000414675 NID1P14543 1247 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 GNSP15586 552 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 CLK1P49759 484 aaKnown RBP14.27□□□□□ -0.12
LRCH3-202ENST00000414675 SMSP52788 366 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 LIMK1P53667 647 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 BTG2P78543 158 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 SLC13A2Q13183 592 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 SNAPC1Q16533 368 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 TSTQ16762 297 aaKnown RBP14.27□□□□□ -0.12
LRCH3-202ENST00000414675 CLEC12AQ5QGZ9 265 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 PTCRAQ6ISU1 281 aaPredicted RBP14.27□□□□□ -0.12
LRCH3-202ENST00000414675 ZCCHC12Q6PEW1 402 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 PAQR6Q6TCH4 344 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 RASSF6Q6ZTQ3 369 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 C1orf216Q8TAB5 229 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 HOXB13Q92826 284 aaPredicted RBP14.27□□□□□ -0.12
LRCH3-202ENST00000414675 TCTN2Q96GX1 697 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 TGM7Q96PF1 710 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 PRSS27Q9BQR3 290 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 AKIP1Q9NQ31 210 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 GPR52Q9Y2T5 361 aa14.27□□□□□ -0.12
LRCH3-202ENST00000414675 RPL36Q9Y3U8 105 aaKnown RBP14.27□□□□□ -0.12
LRCH3-202ENST00000414675 TMEM184BQ9Y519 407 aaPredicted RBP14.27□□□□□ -0.12
LRCH3-202ENST00000414675 LOC100506127A0A0U1RQW1 187 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 KPNA4O00629 521 aaPredicted RBP14.27□□□□□ -0.13
LRCH3-202ENST00000414675 HRO43593 1189 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 SRPX2O60687 465 aaPredicted RBP14.27□□□□□ -0.13
LRCH3-202ENST00000414675 NKX2-2O95096 273 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 SSTR4P31391 388 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 IFNGR2P38484 337 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 POU6F2P78424 691 aaPredicted RBP14.27□□□□□ -0.13
LRCH3-202ENST00000414675 SSX1Q16384 188 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 TRIM16LQ309B1 348 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 EIPR1Q53HC9 387 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 MEDAGQ5VYS4 303 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 SLC27A4Q6P1M0 643 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 MBOAT2Q6ZWT7 520 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 RRM2BQ7LG56 351 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 MRGPREQ86SM8 312 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 CADM4Q8NFZ8 388 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 OR4N2Q8NGD1 307 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 OR4Q3Q8NH05 313 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 TEX47Q8TBZ9 253 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 TMEM80Q96HE8 168 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 OPALINQ96PE5 141 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 PHOX2BQ99453 314 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 CENPOQ9BU64 300 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 UCK1Q9HA47 277 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 CACYBPQ9HB71 228 aaKnown RBP14.27□□□□□ -0.13
LRCH3-202ENST00000414675 DAPK2Q9UIK4 370 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 DTX4Q9Y2E6 619 aa14.27□□□□□ -0.13
LRCH3-202ENST00000414675 MRPS17Q9Y2R5 130 aaKnown RBP14.27□□□□□ -0.13
LRCH3-202ENST00000414675 SEC16AO15027 2179 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 CDC42EP2O14613 210 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 AQP9O43315 295 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 BRINP1O60477 761 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 KCNK2O95069 426 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 LYPD3O95274 346 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 IFI6P09912 130 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 RNH1P13489 461 aaKnown RBP14.26□□□□□ -0.13
LRCH3-202ENST00000414675 BCKDHBP21953 392 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 FPR3P25089 353 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 IFNA8P32881 189 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 CSTF2P33240 577 aaKnown RBP eCLIP14.26□□□□□ -0.132e-7■■■■□ 24.2
LRCH3-202ENST00000414675 RFX3P48380 749 aa14.26□□□□□ -0.13
LRCH3-202ENST00000414675 PPM1FP49593 454 aaPredicted RBP14.26□□□□□ -0.13
LRCH3-202ENST00000414675 GAS1P54826 345 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms