RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SCDO00767 359 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 CPSF4O95639 269 aaKnown RBP13□□□□□ -0.33
HDDC2-202ENST00000398153 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
HDDC2-202ENST00000398153 ANGPTL1O95841 491 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 ZCCHC18P0CG32 403 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 RFX3P48380 749 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 ATP4BP51164 291 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 POLR2JP52435 117 aaKnown RBP13□□□□□ -0.33
HDDC2-202ENST00000398153 DGKQP52824 942 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 GRAMD1BQ3KR37 738 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 EMC4Q5J8M3 183 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 DCST2Q5T1A1 773 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 METTL21CQ5VZV1 264 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 AAGABQ6PD74 315 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 MTERF4Q7Z6M4 381 aaKnown RBP13□□□□□ -0.33
HDDC2-202ENST00000398153 ANKRD46Q86W74 232 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 FADS6Q8N9I5 356 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 OR4K17Q8NGC6 315 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 OR4C3Q8NH37 302 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 OR5AK3PQ8NH89 298 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 SLC35G5Q96KT7 338 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 OR7D2Q96RA2 312 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 EBF4Q9BQW3 602 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 SLC35A5Q9BS91 424 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 SLC6A15Q9H2J7 730 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 SERHLQ9NQF3 203 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 POLE3Q9NRF9 147 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 SH3BGRL2Q9UJC5 107 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 TRIM33Q9UPN9 1127 aa13□□□□□ -0.33
HDDC2-202ENST00000398153 USP9YO00507 2555 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-202ENST00000398153 C15orf38-AP3S2A0A0A6YYH1 394 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 C2orf72A6NCS6 295 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 CCDC154A6NI56 674 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 RFXANKO14593 260 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ADAM10O14672 748 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 NDUFB5O43674 189 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 SCO2O43819 266 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ZG16O60844 167 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ZIC2O95409 532 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-202ENST00000398153 KRT75O95678 551 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 CHMP24386 653 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ACVR2AP27037 513 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 DPP4P27487 766 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 CHI3L1P36222 383 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-202ENST00000398153 TRPC1P48995 793 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 CRYZQ08257 329 aaKnown RBP12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ART3Q13508 389 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ARHGAP11BQ3KRB8 267 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ATAD3BQ5T9A4 648 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 FIGNL1Q6PIW4 674 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ENPP6Q6UWR7 440 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 IFNEQ86WN2 208 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 OR14L1PQ8NHC6 308 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 FBXO30Q8TB52 745 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 DUSP19Q8WTR2 217 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 PMM1Q92871 262 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ABTB1Q969K4 478 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-202ENST00000398153 ITCHQ96J02 903 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 SDF2Q99470 211 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 TIMP4Q99727 224 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 NMUR2Q9GZQ4 415 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 PRDM14Q9GZV8 571 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 CCDC134Q9H6E4 229 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 PNPLA3Q9NST1 481 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 TAS2R10Q9NYW0 307 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 SPRR3Q9UBC9 169 aa12.99□□□□□ -0.33
HDDC2-202ENST00000398153 MYO7BQ6PIF6 2116 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 H3BNH8 94 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 STX11O75558 287 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 GP1BBP13224 206 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 CPN1P15169 458 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 BMP7P18075 431 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 ZFP36L2P47974 494 aaKnown RBP12.98□□□□□ -0.33
HDDC2-202ENST00000398153 KHKP50053 298 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 ATP12AP54707 1039 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 GFRA1P56159 465 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 RCAN2Q14206 197 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 BCL2A1Q16548 175 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 WIPI1Q5MNZ9 446 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-202ENST00000398153 HEPHL1Q6MZM0 1159 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 B3GNT6Q6ZMB0 384 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 ZNF621Q6ZSS3 439 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-202ENST00000398153 MRGPRGQ86SM5 289 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 MARCH3Q86UD3 253 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 OR2M3Q8NG83 312 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 ITLN2Q8WWU7 325 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-202ENST00000398153 MARK4Q96L34 752 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 DSN1Q9H410 356 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 THUMPD1Q9NXG2 353 aaKnown RBP12.98□□□□□ -0.33
HDDC2-202ENST00000398153 COQ3Q9NZJ6 369 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 FLRT3Q9NZU0 649 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 DKKL1Q9UK85 242 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 FBXL2Q9UKC9 423 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 LIPT1Q9Y234 373 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 HRH3Q9Y5N1 445 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 KLF2Q9Y5W3 355 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-202ENST00000398153 DIDO1Q9BTC0 2240 aaKnown RBP12.98□□□□□ -0.33
HDDC2-202ENST00000398153 FREM3P0C091 2139 aa12.98□□□□□ -0.33
HDDC2-202ENST00000398153 DOPEY2Q9Y3R5 2298 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms