RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 MC3RP41968 323 aa13□□□□□ -0.33
NUP98-204ENST00000397004 PDX1P52945 283 aa13□□□□□ -0.33
NUP98-204ENST00000397004 ZNF311Q5JNZ3 666 aa13□□□□□ -0.33
NUP98-204ENST00000397004 GDF7Q7Z4P5 450 aa13□□□□□ -0.33
NUP98-204ENST00000397004 OR5M3Q8NGP4 307 aa13□□□□□ -0.33
NUP98-204ENST00000397004 SMG7Q92540 1137 aaKnown RBP13□□□□□ -0.33
NUP98-204ENST00000397004 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
NUP98-204ENST00000397004 ENAMQ9NRM1 1142 aa13□□□□□ -0.33
NUP98-204ENST00000397004 C20orf141Q9NUB4 165 aa13□□□□□ -0.33
NUP98-204ENST00000397004 NUDT15Q9NV35 164 aa13□□□□□ -0.33
NUP98-204ENST00000397004 RASD1Q9Y272 281 aa13□□□□□ -0.33
NUP98-204ENST00000397004 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
NUP98-204ENST00000397004 ORC5O43913 435 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 GSTM3P21266 225 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ITGB8P26012 769 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 PGGHGQ32M88 737 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 C9orf64Q5T6V5 341 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 SIX5Q8N196 739 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ZNF687Q8N1G0 1237 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 NATD1Q8N6N6 113 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 KREMEN2Q8NCW0 462 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 RGMAQ96B86 450 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 PINK1Q9BXM7 581 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ERVMER34-1Q9H9K5 563 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 TMEM74BQ9NUR3 256 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 POLHQ9Y253 713 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 PRG2P13727 222 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 KELP23276 732 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 BMP8BP34820 402 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 CCR8P51685 355 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 PLBD1Q6P4A8 553 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 TEX261Q6UWH6 196 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ANKRD33Q7Z3H0 272 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 BMP8AQ7Z5Y6 402 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 DCUN1D3Q8IWE4 304 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 BEST4Q8NFU0 473 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 OR9A2Q8NGT5 310 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 BBS10Q8TAM1 723 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 PTP4A1Q93096 173 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 RSPRY1Q96DX4 576 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 AIF1LQ9BQI0 150 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ABCG5Q9H222 651 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 OSGEPL1Q9H4B0 414 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 PRDM7Q9NQW5 492 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 EVA1BQ9NVM1 165 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 KCMF1Q9P0J7 381 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 U3KQ87 197 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 MAGEB4O15481 346 aaPredicted RBP12.99□□□□□ -0.33
NUP98-204ENST00000397004 AHCYP23526 432 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 RNASE12Q5GAN4 147 aaKnown RBP12.99□□□□□ -0.33
NUP98-204ENST00000397004 OR2A1Q8NGT9 310 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 OR52N1Q8NH53 320 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 DOK4Q8TEW6 326 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 KAT2AQ92830 837 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ZNF764Q96H86 408 aaPredicted RBP12.99□□□□□ -0.33
NUP98-204ENST00000397004 PELI2Q9HAT8 420 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 ASB6Q9NWX5 421 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 MARK1Q9P0L2 795 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 EIF3KQ9UBQ5 218 aaKnown RBP12.99□□□□□ -0.33
NUP98-204ENST00000397004 MGAT4AQ9UM21 535 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 AUP1Q9Y679 476 aa12.99□□□□□ -0.33
NUP98-204ENST00000397004 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 DNAJB6O75190 326 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 AIFM1O95831 613 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 CFDP00746 253 aaPredicted RBP12.98□□□□□ -0.33
NUP98-204ENST00000397004 PKLRP30613 574 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 ADAM15Q13444 863 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 WDR45BQ5MNZ6 344 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 FCRLBQ6BAA4 426 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 OAFQ86UD1 273 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 KLHL36Q8N4N3 616 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 SAMD12Q8N8I0 201 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 ZNF680Q8NEM1 530 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 THAP4Q8WY91 577 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 PPP1R16AQ96I34 528 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 COX14Q96I36 57 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 PRSS27Q9BQR3 290 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 HDHD2Q9H0R4 259 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 UBQLN3Q9H347 655 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 COQ3Q9NZJ6 369 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 GPR34Q9UPC5 381 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 LOC105369274A0A096LPK9 316 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 NFATC1O95644 943 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 NOS3P29474 1203 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 CCR6P51684 374 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 FAM111BQ6SJ93 734 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 SSX6Q7RTT6 188 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 OR4N4Q8N0Y3 316 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 OR8H1Q8NGG4 311 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 SLC35A4Q96G79 324 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 CCDC120Q96HB5 630 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 FCRL4Q96PJ5 515 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 TEKT2Q9UIF3 430 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.98□□□□□ -0.33
NUP98-204ENST00000397004 RPS10-NUDT3A0A1W2PQS6 291 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 REM1O75628 298 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 CD3GP09693 182 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 FPR3P25089 353 aa12.98□□□□□ -0.33
NUP98-204ENST00000397004 PTBP1P26599 531 aaKnown RBP eCLIP12.98□□□□□ -0.336e-9■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms