RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SP6Q3SY56 376 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 UGT3A2Q3SY77 523 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM176BQ3YBM2 270 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FBXL19-AS1Q494R0 122 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CFAP221Q4G0U5 840 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DUSP28Q4G0W2 176 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM78AQ5JUQ0 283 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DDX59Q5T1V6 619 aaKnown RBP eCLIP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 KLHDC7AQ5VTJ3 777 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NXNQ6DKJ4 435 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PPP4R4Q6NUP7 873 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 UFSP1Q6NVU6 142 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CYB5D1Q6P9G0 228 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 APOOLQ6UXV4 268 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF562Q6V9R5 426 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF620Q6ZNG0 422 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DNM1P46Q6ZS02 220 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NTM-AS1Q6ZSK4 140 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM92BQ6ZTR7 304 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SYT13Q7L8C5 426 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MAATS1Q7Z4T9 603 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 BIVMQ86UB2 503 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PLA2G4DQ86XP0 818 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ARMC8Q8IUR7 673 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC60Q8IWA6 550 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SKA3Q8IX90 412 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 C9orf40Q8IXQ3 194 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM183AQ8IXX5 376 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CEP57L1Q8IYX8 460 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TDHQ8IZJ6 230 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 APCDD1Q8J025 514 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CCAR2Q8N163 923 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TMTC2Q8N394 836 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TXLNBQ8N3L3 684 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PNKDQ8N490 385 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NOA1Q8NC60 698 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ICA1LQ8NDH6 482 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DENND6BQ8NEG7 585 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 LINS1Q8NG48 757 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 OR52I1Q8NGK6 324 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 OR1K1Q8NGR3 316 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ATL2Q8NHH9 583 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 COQ8AQ8NI60 647 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 C8orf46Q8TAG6 207 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM213BQ8TBF2 198 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DTX3LQ8TDB6 740 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IPO4Q8TEX9 1081 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SSMEM1Q8WWF3 244 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IL1F10Q8WWZ1 152 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ACOT11Q8WXI4 607 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 LPGAT1Q92604 370 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RAD54LQ92698 747 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 HAS2Q92819 552 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SECISBP2LQ93073 1101 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TSACCQ96A04 125 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC25A46Q96AG3 418 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 C3orf49Q96BT1 292 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MOAP1Q96BY2 351 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NSUN4Q96CB9 384 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NEURL3Q96EH8 262 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MMABQ96EY8 250 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 THOC1Q96FV9 657 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 VPS39Q96JC1 886 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DNAJC30Q96LL9 226 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM68Q96MH6 324 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 AMDHD1Q96NU7 426 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DACH2Q96NX9 599 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IP6K3Q96PC2 410 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ACCSQ96QU6 501 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GAD1Q99259 594 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 P2RX4Q99571 388 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RBBP8Q99708 897 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF559Q9BR84 538 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FNDC11Q9BVV2 318 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CACNG6Q9BXT2 260 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GPR63Q9BZJ6 419 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 OR11A1Q9GZK7 315 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CXXC4Q9H2H0 198 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TNMDQ9H2S6 317 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RANBP17Q9H2T7 1088 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 PABPC3Q9H361 631 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DPAGT1Q9H3H5 408 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RNF41Q9H4P4 317 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 MROH8Q9H579 483 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 KIR3DX1Q9H7L2 352 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 NOL11Q9H8H0 719 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM204AQ9H8W3 233 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 IL1RL2Q9HB29 575 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TREX1Q9NSU2 369 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 GIMAP4Q9NUV9 329 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 AIG1Q9NVV5 245 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 FANCLQ9NW38 375 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 VPS18Q9P253 973 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC17A7Q9P2U7 560 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 RHCGQ9UBD6 479 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 TRPC4Q9UBN4 977 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 EIF3KQ9UBQ5 218 aaKnown RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 DBF4Q9UBU7 674 aaPredicted RBP-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 CTSFQ9UBX1 484 aa-0.52□□□□□ -2.49
TRAJ28-201ENST00000390509 HSPB7Q9UBY9 170 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms