RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SGTAO43765 313 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 GALR3O60755 368 aaPredicted RBP14.03□□□□□ -0.16
CTNS-202ENST00000381870 PRR23D2P0DMB1 279 aaPredicted RBP14.03□□□□□ -0.16
CTNS-202ENST00000381870 CORO1AP31146 461 aaKnown RBP14.03□□□□□ -0.16
CTNS-202ENST00000381870 SHC2P98077 582 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 SLC22A10Q63ZE4 541 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 SLC25A25Q6KCM7 469 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 ARL9Q6T311 187 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 TMUB2Q71RG4 321 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 MRGPREQ86SM8 312 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 CPXM2Q8N436 756 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 OR51G2Q8NGK0 314 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 OR6T1Q8NGN1 323 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 HAVCR2Q8TDQ0 301 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 GCDHQ92947 438 aaPredicted RBP14.03□□□□□ -0.16
CTNS-202ENST00000381870 ECHDC3Q96DC8 303 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 EXOSC3Q9NQT5 275 aaKnown RBP14.03□□□□□ -0.16
CTNS-202ENST00000381870 TDP1Q9NUW8 608 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 MARK1Q9P0L2 795 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 ZNF69Q9UC07 566 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 PRKAG2Q9UGJ0 569 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 IL20RAQ9UHF4 553 aa14.03□□□□□ -0.16
CTNS-202ENST00000381870 EXOGQ9Y2C4 368 aaKnown RBP14.03□□□□□ -0.16
CTNS-202ENST00000381870 TMEM202A6NGA9 273 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 MPTX1A8MV57 137 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 HMGN4O00479 90 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 SOCS6O14544 535 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 GABRA1P14867 456 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 GALP22466 123 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 CALCRP30988 508 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 TRIM23P36406 574 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 ATP5C1P36542 298 aaKnown RBP14.02□□□□□ -0.16
CTNS-202ENST00000381870 GDNFP39905 211 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 FGL2Q14314 439 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 SYPL1Q16563 259 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 MED27Q6P2C8 311 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 CRTC1Q6UUV9 634 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 CEACAM19Q7Z692 300 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 IFNL1Q8IU54 200 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 LRRC56Q8IYG6 542 aaPredicted RBP14.02□□□□□ -0.16
CTNS-202ENST00000381870 OR4Q3Q8NH05 313 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 ZFPM2Q8WW38 1151 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 LCORQ96JN0 433 aaPredicted RBP14.02□□□□□ -0.16
CTNS-202ENST00000381870 POLMQ9NP87 494 aaPredicted RBP14.02□□□□□ -0.16
CTNS-202ENST00000381870 CD84Q9UIB8 345 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 PURGQ9UJV8 347 aaKnown RBP14.02□□□□□ -0.16
CTNS-202ENST00000381870 SH2B3Q9UQQ2 575 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 RCE1Q9Y256 329 aa14.02□□□□□ -0.16
CTNS-202ENST00000381870 PRG3Q9Y2Y8 225 aaPredicted RBP14.02□□□□□ -0.16
CTNS-202ENST00000381870 PRAMEF27A3QJZ7 478 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 E9PI62 339 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 ADAM11O75078 769 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 GNSP15586 552 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 RNF144AP50876 292 aaPredicted RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 PSMA6P60900 246 aaKnown RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 S100A12P80511 92 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 MEF2AQ02078 507 aaPredicted RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 TSTA3Q13630 321 aaPredicted RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 LTB4RQ15722 352 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 B3GNTL1Q67FW5 361 aaPredicted RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 SYT9Q86SS6 491 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 MCATQ8IVS2 390 aaKnown RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 HS6ST3Q8IZP7 471 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 APCDD1Q8J025 514 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 KRT78Q8N1N4 520 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 EIF4E3Q8N5X7 224 aaKnown RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 OR5T2Q8NGG2 359 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 RFKQ969G6 155 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 NEURL3Q96EH8 262 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 UROC1Q96N76 676 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 TREX2Q9BQ50 279 aaPredicted RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 ARL6Q9H0F7 186 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 ZNF768Q9H5H4 540 aaKnown RBP14.02□□□□□ -0.17
CTNS-202ENST00000381870 MYNNQ9NPC7 610 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 MIEF1Q9NQG6 463 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 EMC3Q9P0I2 261 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 ERVK-19Q9WJR5 959 aa14.02□□□□□ -0.17
CTNS-202ENST00000381870 A0A087WUU8 490 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 ZC3H12DA2A288 527 aaKnown RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 FAM183AA6NL82 134 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 SLC16A8O95907 504 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 EPPINO95925 133 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 HMGN1P05114 100 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 GIPP09681 153 aaPredicted RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 ZDHHC11BP0C7U3 371 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 CCR8P51685 355 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 SEC61A1P61619 476 aaKnown RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 AP1S1P61966 158 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 ERVK-25P63136 954 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 GK2Q14410 553 aaPredicted RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 CTXN3Q4LDR2 81 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 MPP7Q5T2T1 576 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 METTL11BQ5VVY1 283 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 GPR142Q7Z601 462 aa14.01□□□□□ -0.17
CTNS-202ENST00000381870 CBARPQ8N350 705 aaPredicted RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 RELL2Q8NC24 303 aaPredicted RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 BCL7CQ8WUZ0 217 aaPredicted RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 FAM46AQ96IP4 442 aaKnown RBP14.01□□□□□ -0.17
CTNS-202ENST00000381870 TIMP4Q99727 224 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms