RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 QPCTLQ9NXS2 382 aa17.12■□□□□ 0.33
SSU72-203ENST00000378725 WIF1Q9Y5W5 379 aa17.12■□□□□ 0.33
SSU72-203ENST00000378725 EXPH5Q8NEV8 1989 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 A0A1W2PQD3 144 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 NPIPA5E9PKD4 350 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 ACOT7O00154 380 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 TNFRSF21O75509 655 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 ZIC2O95409 532 aaPredicted RBP17.11■□□□□ 0.33
SSU72-203ENST00000378725 CBX6O95503 412 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 COX4I1P13073 169 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 MASP1P48740 699 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 ATP12AP54707 1039 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 MAPK11Q15759 364 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 IGFBP7Q16270 282 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 SYPL1Q16563 259 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 MMEL1Q495T6 779 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 FLYWCH1Q4VC44 716 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 KLHL26Q53HC5 615 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 GKAP1Q5VSY0 366 aaPredicted RBP17.11■□□□□ 0.33
SSU72-203ENST00000378725 REP15Q6BDI9 236 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 MARCH3Q86UD3 253 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 FAM109AQ8N4B1 249 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 GALNT11Q8NCW6 608 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 JSRP1Q96MG2 331 aaPredicted RBP17.11■□□□□ 0.33
SSU72-203ENST00000378725 GNRHR2Q96P88 292 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 CPPED1Q9BRF8 314 aaPredicted RBP17.11■□□□□ 0.33
SSU72-203ENST00000378725 UBQLN3Q9H347 655 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 IKZF5Q9H5V7 419 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.11■□□□□ 0.33
SSU72-203ENST00000378725 NPIPA1Q9UND3 350 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 CORO2BQ9UQ03 480 aa17.11■□□□□ 0.33
SSU72-203ENST00000378725 SPTA1P02549 2419 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 IGLV3-32A0A0A0MS00 114 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 FAM166BA8MTA8 275 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 EVPLLA8MZ36 301 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 GNB5O14775 395 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 MRASO14807 208 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 TFECO14948 347 aaPredicted RBP17.1■□□□□ 0.33
SSU72-203ENST00000378725 CBR3O75828 277 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 TFPTP0C1Z6 253 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 DCTP40126 519 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 DSTNP60981 165 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 SLC10A1Q14973 349 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 ZNF141Q15928 474 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 TRMT5Q32P41 509 aaKnown RBP17.1■□□□□ 0.33
SSU72-203ENST00000378725 TYW3Q6IPR3 259 aaKnown RBP17.1■□□□□ 0.33
SSU72-203ENST00000378725 LRRC74BQ6ZQY2 392 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 PLCZ1Q86YW0 608 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 ANKFN1Q8N957 763 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 ST6GALNAC3Q8NDV1 305 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 DUSP19Q8WTR2 217 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 OIT3Q8WWZ8 545 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 PMM1Q92871 262 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 TBL1XR1Q9BZK7 514 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 ZNF703Q9H7S9 590 aaPredicted RBP17.1■□□□□ 0.33
SSU72-203ENST00000378725 HHATLQ9HCP6 504 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 PLSCR2Q9NRY7 297 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 MKLN1Q9UL63 735 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 C15orf41Q9Y2V0 281 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 HRH3Q9Y5N1 445 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 CFAP46Q8IYW2 2715 aa17.1■□□□□ 0.33
SSU72-203ENST00000378725 B4DXG7 233 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 SCDO00767 359 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 SCO2O43819 266 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 KIAA0513O60268 411 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 DCTN3O75935 186 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 H6PDO95479 791 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 ANGPTL1O95841 491 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 IGHG3P01860 377 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 PLA2G2AP14555 144 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 PRDX6P30041 224 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 MAGEA5P43359 124 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 C17orf67Q0P5P2 114 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 GPAT3Q53EU6 434 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 FRRS1Q6ZNA5 592 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 OLIG3Q7RTU3 272 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 MISPQ8IVT2 679 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 C10orf111Q8N326 155 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 FADS6Q8N9I5 356 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 ZNF527Q8NB42 609 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 PCYOX1LQ8NBM8 494 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 SLC38A5Q8WUX1 472 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 LRRC58Q96CX6 371 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 LRRC37BQ96QE4 947 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 TSPAN10Q9H1Z9 355 aaPredicted RBP17.09■□□□□ 0.33
SSU72-203ENST00000378725 SLC38A1Q9H2H9 487 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 ACKR4Q9NPB9 350 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 A4GALTQ9NPC4 353 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 P2RX2Q9UBL9 471 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 B4GALT7Q9UBV7 327 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 SEC14L3Q9UDX4 400 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 KCNE5Q9UJ90 142 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 WDR45Q9Y484 360 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 DTNAQ9Y4J8 743 aa17.09■□□□□ 0.33
SSU72-203ENST00000378725 SPENQ96T58 3664 aaKnown RBP17.09■□□□□ 0.33
SSU72-203ENST00000378725 NPIPA5A0A0B4J1W7 369 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 NPIPA7E9PJI5 369 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms