RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 FOLH1Q04609 750 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 SLC10A1Q14973 349 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 GTDC1Q4AE62 458 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 ZNF621Q6ZSS3 439 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 SLC29A4Q7RTT9 530 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 WDR53Q7Z5U6 358 aaPredicted RBP12.6□□□□□ -0.39
PRPF18-202ENST00000378572 C7orf57Q8NEG2 295 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 ZNF721Q8TF20 911 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 ANKRD9Q96BM1 317 aaPredicted RBP12.6□□□□□ -0.39
PRPF18-202ENST00000378572 CLPTM1LQ96KA5 538 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 GLIPR2Q9H4G4 154 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 BOKQ9UMX3 212 aaPredicted RBP12.6□□□□□ -0.39
PRPF18-202ENST00000378572 CORO2BQ9UQ03 480 aa12.6□□□□□ -0.39
PRPF18-202ENST00000378572 INTS1Q8N201 2190 aaKnown RBP12.6□□□□□ -0.39
PRPF18-202ENST00000378572 TRGV5A0A0B4J1U4 118 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 PRORSD1PA6NEY8 169 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 EVPLLA8MZ36 301 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 GPR75O95800 540 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 GSNP06396 782 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 EFNA1P20827 205 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 UQCRC2P22695 453 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 IGLV3-21P80748 117 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 BIKQ13323 160 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 RABL3Q5HYI8 236 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 TMEM64Q6YI46 380 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 RNF111Q6ZNA4 994 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 DMRTC2Q8IXT2 367 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ZFP90Q8TF47 636 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SENP5Q96HI0 755 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 TTYH2Q9BSA4 534 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 TPT1P8Q9HAU6 139 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SIRT3Q9NTG7 399 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ERVK-19Q9WJR5 959 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 DNAJC13O75165 2243 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 WASHC1A8K0Z3 465 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 CLIC1O00299 241 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 AQP7O14520 342 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 CIB2O75838 187 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SLITRK5O94991 958 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 IGHG3P01860 377 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ABCB1P08183 1280 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 GLI4P10075 376 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 CPMP14384 443 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 GPX2P18283 190 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 XKP51811 444 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 NCBP2P52298 156 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ART1P52961 327 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 MTPNP58546 118 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 TFF3Q07654 80 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 BNIP2Q12982 314 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 GAB1Q13480 694 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SELPLGQ14242 412 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ZNF267Q14586 743 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 FXNQ16595 210 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SLC22A10Q63ZE4 541 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ZNF551Q7Z340 670 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 NET1Q7Z628 596 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 LRRC25Q8N386 305 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 NUBPLQ8TB37 319 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SFXN5Q8TD22 340 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 MOAP1Q96BY2 351 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SPACA9Q96E40 222 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 TREX2Q9BQ50 279 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 MUC13Q9H3R2 512 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 RAD21L1Q9H4I0 556 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 ALG2Q9H553 416 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 KAT8Q9H7Z6 458 aaKnown RBP12.59□□□□□ -0.39
PRPF18-202ENST00000378572 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 B4GALT7Q9UBV7 327 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 KCNN3Q9UGI6 736 aa12.59□□□□□ -0.39
PRPF18-202ENST00000378572 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.39
PRPF18-202ENST00000378572 FAM47E-STBD1D6RA91 191 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 H0YHG0 523 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 HRKO00198 91 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 WDR1O75083 606 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 PDE5AO76074 875 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 KRT75O95678 551 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 PORP16435 677 aaPredicted RBP12.58□□□□□ -0.4
PRPF18-202ENST00000378572 IGFBP2P18065 325 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 MAGEA8P43361 318 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 GSK3BP49841 420 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 LIPEQ05469 1076 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 TRAP1Q12931 704 aaKnown RBP12.58□□□□□ -0.4
PRPF18-202ENST00000378572 TRIM25Q14258 630 aaKnown RBP12.58□□□□□ -0.4
PRPF18-202ENST00000378572 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 FAM180BQ6P0A1 224 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 ACBD4Q8NC06 268 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 ASB9Q96DX5 294 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 AURKBQ96GD4 344 aaPredicted RBP12.58□□□□□ -0.4
PRPF18-202ENST00000378572 FBXL20Q96IG2 436 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 ECSITQ9BQ95 431 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 PELOQ9BRX2 385 aaKnown RBP12.58□□□□□ -0.4
PRPF18-202ENST00000378572 SLC35A5Q9BS91 424 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 THUMPD3Q9BV44 507 aaKnown RBP12.58□□□□□ -0.4
PRPF18-202ENST00000378572 SPATA9Q9BWV2 254 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 SLC6A15Q9H2J7 730 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms