RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LMF1Q96S06 567 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GALNT9Q9HCQ5 603 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM5Q9Y2B1 443 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 VEGFDO43915 354 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GNRH1P01148 92 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PTPN6P29350 595 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 RPS19P39019 145 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 EIF2DP41214 584 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 TAP2Q03519 686 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CDNFQ49AH0 187 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 XAF1Q6GPH4 301 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 UNC5DQ6UXZ4 953 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 RTN4RL1Q86UN2 441 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF101Q8IZC7 436 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF619Q8N2I2 560 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 OR13C2Q8NGS9 318 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 OR51J1Q9H342 316 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SEC61A2Q9H9S3 476 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 Q9N2J8 555 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF226Q9NYT6 803 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 LTBP4Q8N2S1 1624 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PSME4Q14997 1843 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SOCS6O14544 535 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 HCKP08631 526 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 FGFBP1Q14512 234 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 UBE2NLQ5JXB2 153 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PPP2R2DQ66LE6 453 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ALG1LQ6GMV1 187 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 FTMTQ8N4E7 242 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CREB3L4Q8TEY5 395 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GIMAP1Q8WWP7 306 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CST11Q9H112 138 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SLC28A3Q9HAS3 691 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CNOT2Q9NZN8 540 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SCO2O43819 266 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 RPS15AP62244 130 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 MLLT11Q13015 90 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SF3A2Q15428 464 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SYT6Q5T7P8 510 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GPR135Q8IZ08 494 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM255BQ8WV15 326 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 HS6ST2Q96MM7 605 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 MS4A4EQ96PG1 132 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 OR2M4Q96R27 311 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 TAPBPLQ9BX59 468 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF471Q9BX82 626 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 HYKKA2RU49 373 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 DISC1C4P0D8 188 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ADAMTS4O75173 837 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CSNK1DP48730 415 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 POU4F2Q12837 409 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PYCR3Q53H96 274 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ALKBH2Q6NS38 261 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 THAP6Q8TBB0 222 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 BCL7CQ8WUZ0 217 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SLC22A18Q96BI1 424 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 MNTQ99583 582 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GPR174Q9BXC1 333 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 DHDHQ9UQ10 334 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 NUBP2Q9Y5Y2 271 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 RFPL3O75679 317 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 LIPCP11150 499 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 GDI2P50395 445 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 NR0B1P51843 470 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 RPS21P63220 83 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PCGF3Q3KNV8 242 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ACBD7Q8N6N7 88 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 LMX1AQ8TE12 382 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ARSGQ96EG1 525 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 DTD2Q96FN9 168 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 PEX11GQ96HA9 241 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 SLC46A2Q9BY10 475 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 CPEB1Q9BZB8 566 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 OR8D2Q9GZM6 311 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 RBM38Q9H0Z9 239 aaKnown RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ABCG4Q9H172 646 aa6.16□□□□□ -1.42
SMC1A-202ENST00000375340 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-202ENST00000375340 LOC105369274A0A096LPK9 316 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 PRICKLE3O43900 615 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 PRKCAP17252 672 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 SDHBP21912 280 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 MAPK3P27361 379 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 RBMS1P29558 406 aaKnown RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ACTA2P62736 377 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ACTG2P63267 376 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 GK2Q14410 553 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 OXA1LQ15070 435 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ABCA11PQ4W5N1 156 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 OR4N4Q8N0Y3 316 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 PFN4Q8NHR9 129 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 KATNBL1Q9H079 304 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 HRASLS2Q9NWW9 162 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 PADI2Q9Y2J8 665 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 AIFM1O95831 613 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 UCHL1P09936 223 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CCR6P51684 374 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 NKX3-2P78367 333 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CDK3Q00526 305 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms