RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 SSX4O60224 188 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 PLOD3O60568 738 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 RAMP1O60894 148 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 ESRRBO95718 433 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 GSTA2P09210 222 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 TRA2BP62995 288 aaKnown RBP13.7□□□□□ -0.22
SSR4-204ENST00000370087 MRPS22P82650 360 aaKnown RBP13.7□□□□□ -0.22
SSR4-204ENST00000370087 TMEM249Q2WGJ8 235 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 GLYR1Q49A26 553 aaPredicted RBP13.7□□□□□ -0.22
SSR4-204ENST00000370087 FIGNL1Q6PIW4 674 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 GABRG1Q8N1C3 465 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 SPATA4Q8NEY3 305 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 SELENOMQ8WWX9 145 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 C11orf24Q96F05 449 aaPredicted RBP13.7□□□□□ -0.22
SSR4-204ENST00000370087 HS6ST2Q96MM7 605 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 PTGES2Q9H7Z7 377 aa13.7□□□□□ -0.22
SSR4-204ENST00000370087 A0A0J9YW62 118 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 CCDC189A1A4V9 331 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 RPS17P08708 135 aaKnown RBP13.69□□□□□ -0.22
SSR4-204ENST00000370087 PSMA4P25789 261 aaKnown RBP13.69□□□□□ -0.22
SSR4-204ENST00000370087 RFX3P48380 749 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 CDH13P55290 713 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 PSPHP78330 225 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 GRAMD1BQ3KR37 738 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 UBAP2Q5T6F2 1119 aaKnown RBP13.69□□□□□ -0.22
SSR4-204ENST00000370087 TFAP2EQ6VUC0 442 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.69□□□□□ -0.22
SSR4-204ENST00000370087 NUFIP2Q7Z417 695 aaKnown RBP13.69□□□□□ -0.22
SSR4-204ENST00000370087 FAM9CQ8IZT9 166 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 ARIH2OSQ8N7S6 290 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 CEP112Q8N8E3 955 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 STEAP2Q8NFT2 490 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 SLC9A6Q92581 669 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 BRF2Q9HAW0 419 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 LRTM1Q9HBL6 345 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 SDHAF3Q9NRP4 125 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 FBXO34Q9NWN3 711 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 TAS2R9Q9NYW1 312 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 XPR1Q9UBH6 696 aa13.69□□□□□ -0.22
SSR4-204ENST00000370087 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■■□□□ 14.5
SSR4-204ENST00000370087 GXYLT2A0PJZ3 443 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 STX16-NPEPL1H3BU86 382 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 STX16O14662 325 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 PCDH7O60245 1069 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 UTS2O95399 124 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 PSMG1O95456 288 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 IL33O95760 270 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 ANGPTL1O95841 491 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 ZNF16P17020 682 aaPredicted RBP13.68□□□□□ -0.22
SSR4-204ENST00000370087 ZNF17P17021 662 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 SHC1P29353 583 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 STX2P32856 288 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 C21orf58P58505 322 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 IRX1P78414 480 aaPredicted RBP13.68□□□□□ -0.22
SSR4-204ENST00000370087 CYP27C1Q4G0S4 372 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 TMEM107Q6UX40 140 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 DNAJC14Q6Y2X3 702 aaPredicted RBP13.68□□□□□ -0.22
SSR4-204ENST00000370087 DTX2Q86UW9 622 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 STK32CQ86UX6 486 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 CCDC25Q86WR0 208 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 OR10H5Q8NGA6 315 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 OR2V1Q8NHB1 315 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 ZNF483Q8TF39 744 aaPredicted RBP13.68□□□□□ -0.22
SSR4-204ENST00000370087 ABHD3Q8WU67 409 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 ROBO4Q8WZ75 1007 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 HTRA1Q92743 480 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 VPS11Q9H270 941 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 ESRP2Q9H6T0 727 aaKnown RBP13.68□□□□□ -0.22
SSR4-204ENST00000370087 SLC35C2Q9NQQ7 365 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 SENP1Q9P0U3 644 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 MCM8Q9UJA3 840 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 MCTS1Q9ULC4 181 aaKnown RBP13.68□□□□□ -0.22
SSR4-204ENST00000370087 B3GALT5Q9Y2C3 310 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 MALRD1Q5VYJ5 2156 aa13.68□□□□□ -0.22
SSR4-204ENST00000370087 ALPK2Q86TB3 2170 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 FAM187AA6NFU0 413 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 SHISA9B4DS77 424 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 ADAMDEC1O15204 470 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 WIPF1O43516 503 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 OR4F21O95013 312 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 SYNGR4O95473 234 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 TUBBP07437 444 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 ADH6P28332 368 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 MAGEA4P43358 317 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 CASP9P55211 416 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 CALCOCO2Q13137 446 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 NAB1Q13506 487 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 TRADDQ15628 312 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 SFRP5Q5T4F7 317 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 KLC3Q6P597 504 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 IL17RELQ6ZVW7 336 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 ZNF572Q7Z3I7 529 aaPredicted RBP13.67□□□□□ -0.22
SSR4-204ENST00000370087 CCDC91Q7Z6B0 441 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 GTPBP8Q8N3Z3 284 aaPredicted RBP13.67□□□□□ -0.22
SSR4-204ENST00000370087 POC1BQ8TC44 478 aa13.67□□□□□ -0.22
SSR4-204ENST00000370087 PIWIL2Q8TC59 973 aaKnown RBP13.67□□□□□ -0.22
SSR4-204ENST00000370087 C16orf78Q8WTQ4 265 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms