RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 LRFN5Q96NI6 719 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 TGIF2Q9GZN2 237 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 DPEP3Q9H4B8 488 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 CYTIPO60759 359 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 CLDN7O95471 211 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 PIGFQ07326 219 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 GPR155Q7Z3F1 870 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 CELF5Q8N6W0 485 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 OR51A7Q8NH64 312 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ANKRD60Q9BZ19 345 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 H7C1Q1 480 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 FKBP1BP68106 108 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RAB40BQ12829 278 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 YIF1BQ5BJH7 314 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RNF111Q6ZNA4 994 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 LMF1Q96S06 567 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 PRDM9Q9NQV7 894 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 WASH4PA8MWX3 477 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 K7EQM0 130 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ARPC1BO15143 372 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 ASGR2P07307 311 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 OR4Q2P0C623 313 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SGSHP51688 502 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 GPR176Q14439 515 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 POU4F3Q15319 338 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 CATSPEREQ5SY80 951 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 TXNDC5Q8NBS9 432 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 MUL1Q969V5 352 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ACAD8Q9UKU7 415 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 MITFO75030 526 aaPredicted RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 APBB3O95704 486 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RNH1P13489 461 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 MMP12P39900 470 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RAB11AP62491 216 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 OGDHQ02218 1023 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 NCBP2-AS2Q69YL0 99 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 LCN8Q6JVE9 175 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 OR9K2Q8NGE7 335 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 MED30Q96HR3 178 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ARAFP10398 606 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 UNGP13051 313 aaPredicted RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 APLNRP35414 380 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 GDF5P43026 501 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ZDHHC24Q6UX98 284 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 MRPL21Q7Z2W9 205 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 STEAP2Q8NFT2 490 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RDH14Q9HBH5 336 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 AIG1Q9NVV5 245 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ENPP5Q9UJA9 477 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 MYBPHLA2RUH7 354 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SLC16A5O15375 505 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 TK1P04183 234 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 DDCP20711 480 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 STK19P49842 368 aaPredicted RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 OR5D16Q8NGK9 328 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 OR9A2Q8NGT5 310 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 GPR148Q8TDV2 347 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 KLK6Q92876 244 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 GPR20Q99678 358 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 CWH43Q9H720 699 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 E7ESA3 106 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 OSMP13725 252 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SRPXP78539 464 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 PRKCZQ05513 592 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 CD163Q86VB7 1156 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SIMC1Q8NDZ2 872 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 NDNFQ8TB73 568 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 TLR9Q9NR96 1032 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SPATA31A5Q5VU36 1347 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SPATA31A7Q8IWB4 1347 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ARRB1P49407 418 aaPredicted RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 SLC25A11Q02978 314 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 GPR19Q15760 415 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 EOGTQ5NDL2 527 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 REM2Q8IYK8 340 aaPredicted RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 SYNPO2LQ9H987 977 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ZIC2O95409 532 aaPredicted RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 CRABP1P29762 137 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 GJA5P36382 358 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 PRAMEF8Q5VWM4 474 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 PRAMEF7Q5VXH5 474 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 ASPGQ86U10 573 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RNF32Q9H0A6 362 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 MMP28Q9H239 520 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 KLHL42Q9P2K6 505 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 EXO1Q9UQ84 846 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 SALL3Q9BXA9 1300 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RAB40ALP0C0E4 278 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 C2orf27AQ580R0 203 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 PLBD1Q6P4A8 553 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 LEG1Q6P5S2 330 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 RAB40AQ8WXH6 277 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 LDB2O43679 373 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 CLEC20AQ6ZU45 233 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 URB1O60287 2271 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 A6NIZ1 184 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 FKTNO75072 461 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 POP7O75817 140 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 CNR1P21554 472 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms