RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CASC3O15234 703 aaKnown RBP13.33□□□□□ -0.28
SIRPA-202ENST00000358771 PRKAR1AP10644 381 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 WNT4P56705 351 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 DUSP5Q16690 384 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 TUBA3EQ6PEY2 450 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 SHISA6Q6ZSJ9 500 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 SPATC1Q76KD6 591 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 FAM220AQ7Z4H9 259 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 CAMKMTQ7Z624 323 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 LSRQ86X29 649 aaPredicted RBP13.33□□□□□ -0.28
SIRPA-202ENST00000358771 ACBD7Q8N6N7 88 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 OR7G2Q8NG99 324 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 TBC1D20Q96BZ9 403 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 WACQ9BTA9 647 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 POLR1DQ9Y2S0 133 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 HTTP42858 3142 aa13.33□□□□□ -0.28
SIRPA-202ENST00000358771 PRODHO43272 600 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 NDUFB5O43674 189 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TFPIP10646 304 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 CAPZA2P47755 286 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 MAN2A2P49641 1150 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 C1orf189Q5VU69 101 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 FGD2Q7Z6J4 655 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 LUZP2Q86TE4 346 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 FAM83FQ8NEG4 500 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 RSC1A1Q92681 617 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 OBP2AQ9NY56 170 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 YARS2Q9Y2Z4 477 aaKnown RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 LILRB5O75023 590 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 PPP1R3DO95685 299 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 IL12BP29460 328 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TNFRSF4P43489 277 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 RABIFP47224 123 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 DLX2Q07687 328 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 PDE7AQ13946 482 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 FXNQ16595 210 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 PRR22Q8IZ63 422 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 OR52E2Q8NGJ4 325 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 NDC1Q9BTX1 674 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TCEAL2Q9H3H9 227 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 SEMA4GQ9NTN9 838 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TBCCD1Q9NVR7 557 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 MCUBQ9NWR8 336 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 PIP5K1CO60331 668 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 DBIP07108 87 aaKnown RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TGM4P49221 684 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TNFRSF17Q02223 184 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TFF2Q03403 129 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 ZFP69Q49AA0 526 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 PARP16Q8N5Y8 322 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 TMEM239Q8WW34 195 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 COX14Q96I36 57 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 CNDP2Q96KP4 475 aaKnown RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 GAS2L1Q99501 681 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 GABARAPL3Q9BY60 117 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 OR52D1Q9H346 318 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 ZNF221Q9UK13 617 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 SCML1Q9UN30 329 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 ERVK-19Q9WJR5 959 aa13.32□□□□□ -0.28
SIRPA-202ENST00000358771 ZNF443Q9Y2A4 671 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-202ENST00000358771 CDC14CA4D256 554 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 PEX12O00623 359 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 SPINT1O43278 529 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 NTN1O95631 604 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 GPR75O95800 540 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 EML2O95834 649 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 COL9A1P20849 921 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 RAB15P59190 212 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 ELOAQ14241 798 aaKnown RBP13.31□□□□□ -0.28
SIRPA-202ENST00000358771 PRSS53Q2L4Q9 553 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 COMMD2Q86X83 199 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 ELSPBP1Q96BH3 223 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 LMAN1LQ9HAT1 526 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 ATP13A2Q9NQ11 1180 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 TRIM36Q9NQ86 728 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 CNOT2Q9NZN8 540 aaKnown RBP13.31□□□□□ -0.28
SIRPA-202ENST00000358771 GNG8Q9UK08 70 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 EXOSC1Q9Y3B2 195 aaKnown RBP13.31□□□□□ -0.28
SIRPA-202ENST00000358771 GVINP1Q7Z2Y8 2422 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 OR5K4A6NMS3 321 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 PRAMEF26H0Y7S4 382 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
SIRPA-202ENST00000358771 EIF2DP41214 584 aaKnown RBP13.31□□□□□ -0.28
SIRPA-202ENST00000358771 HYAL1Q12794 435 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 PON3Q15166 354 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 LCN1P1Q5VSP4 162 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 CCDC71Q8IV32 467 aaPredicted RBP13.31□□□□□ -0.28
SIRPA-202ENST00000358771 EFHD2Q96C19 240 aaPredicted RBP13.31□□□□□ -0.28
SIRPA-202ENST00000358771 SLC35A4Q96G79 324 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 TBL1XR1Q9BZK7 514 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 MCIDASD6RGH6 385 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 UBXN7O94888 489 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 CLEC2LP0C7M8 214 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 CD83Q01151 205 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 MFSD12Q6NUT3 480 aa13.31□□□□□ -0.28
SIRPA-202ENST00000358771 MCATQ8IVS2 390 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms