RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TEX19Q8NA77 164 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 OR11G2Q8NGC1 345 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 SCAMP4Q969E2 229 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 TRMT2BQ96GJ1 504 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 LMLNQ96KR4 655 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 C12orf66Q96MD2 445 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 SPATA5L1Q9BVQ7 753 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 C20orf85Q9H1P6 137 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 DDX31Q9H8H2 851 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 HMX1Q9NP08 348 aaPredicted RBP11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 PRKAG2Q9UGJ0 569 aa11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 PPIEQ9UNP9 301 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-201ENST00000357276 COL4A6Q14031 1691 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 PLPP1O14494 284 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 PLPP2O43688 288 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 KELP23276 732 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 SMAD3P84022 425 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 E2F1Q01094 437 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 RPL6Q02878 288 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 FUT5Q11128 374 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 GNA13Q14344 377 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 TCTE1Q5JU00 501 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 HIST2H2AA3Q6FI13 130 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 PRSS55Q6UWB4 352 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 TMEM150AQ86TG1 271 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 ZNF527Q8NB42 609 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 SLC5A11Q8WWX8 675 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 THAP4Q8WY91 577 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 TRABD2BA6NFA1 517 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 PRAF2O60831 178 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 SERPIND1P05546 499 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 TBXA2RP21731 343 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 PDHA2P29803 388 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 RPS7P62081 194 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 MEF2AQ02078 507 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 SLC25A35Q3KQZ1 300 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 HENMT1Q5T8I9 393 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 B3GNTL1Q67FW5 361 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 KIAA1161Q6NSJ0 714 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 ZNF740Q8NDX6 193 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 BBS10Q8TAM1 723 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 NR4A3Q92570 626 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 DIO2Q92813 273 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 OSTF1Q92882 214 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 TIFAQ96CG3 184 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 DDOQ99489 341 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 ANKRD19PQ9H560 264 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 IFT46Q9NQC8 304 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 TDP1Q9NUW8 608 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 CNIH4Q9P003 139 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 RPS6KB2Q9UBS0 482 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 DYRK1BQ9Y463 629 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 NPFFR2Q9Y5X5 522 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 BACE2Q9Y5Z0 518 aa11.32□□□□□ -0.6
SMARCAL1-201ENST00000357276 H3BUI4 141 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 SSNA1O43805 119 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 GALR3O60755 368 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 INHAP05111 366 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 C4BPBP20851 252 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 FPR3P25089 353 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 IFNGR2P38484 337 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 SLC11A1P49279 550 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 PITPNAQ00169 270 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 TRAM1Q15629 374 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 SYTL3Q4VX76 610 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 FAM27D1Q5T7N8 215 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 FAM198BQ6UWH4 519 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 Q6ZTK2 550 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 HSD11B1LQ7Z5J1 315 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 TRAM1L1Q8N609 369 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 RGMAQ96B86 450 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 SLC22A12Q96S37 553 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 MS4A7Q9GZW8 240 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 OR51I1Q9H343 314 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 BRD7Q9NPI1 651 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 CD93Q9NPY3 652 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 CA5BQ9Y2D0 317 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 CHST2Q9Y4C5 530 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 CPN1P15169 458 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 GNSP15586 552 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 CD70P32970 193 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 BSGP35613 385 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 STAT5AP42229 794 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 TSPAN5P62079 268 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 PGGHGQ32M88 737 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 LRFN4Q6PJG9 635 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 SLC7A5P2Q9GIP4 190 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 PLEKHA1Q9HB21 404 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 HINT3Q9NQE9 182 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 ZC4H2Q9NQZ6 224 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 ACSS1Q9NUB1 689 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 CAMK2AQ9UQM7 478 aa11.31□□□□□ -0.6
SMARCAL1-201ENST00000357276 HS3ST2Q9Y278 367 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms