RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CYHR1Q6ZMK1 362 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 PTOV1Q86YD1 416 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 SDR16C5Q8N3Y7 309 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 OR2L2Q8NH16 312 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 COQ8AQ8NI60 647 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 ELSPBP1Q96BH3 223 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 CDCA4Q9BXL8 241 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 DPH1Q9BZG8 443 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 NT5DC2Q9H857 520 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 BLOC1S5-TXNDC5H3BN57 136 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 NCR1O76036 304 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 TGM1P22735 817 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 GNALP38405 381 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 CXCL12P48061 93 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 RAB28P51157 221 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 PHF19Q5T6S3 580 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 KIAA1143Q96AT1 154 aaPredicted RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 GAL3ST4Q96RP7 486 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 PITHD1Q9GZP4 211 aaPredicted RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 CXorf36Q9H7Y0 433 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 MRPL15Q9P015 296 aaKnown RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 SCN1AP35498 2009 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 HOXC11O43248 304 aaPredicted RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 EPHA2P29317 976 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 MC3RP41968 323 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 TDGQ13569 410 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 ADAMTS18Q8TE60 1221 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 TRPV4Q9HBA0 871 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 TMEM184CQ9NVA4 438 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 THEGLP0DJG4 465 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 TRA2BP62995 288 aaKnown RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 PARS2Q7L3T8 475 aaKnown RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 OR9A2Q8NGT5 310 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 APOOQ9BUR5 198 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 HHATLQ9HCP6 504 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 SLC6A13Q9NSD5 602 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 ACER3Q9NUN7 267 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 ENTPD2Q9Y5L3 495 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 POLR2CP19387 275 aaPredicted RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 PUDPQ08623 228 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 SMCO1Q147U7 214 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 PRAMEF17Q5VTA0 474 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 SFRP4Q6FHJ7 346 aaPredicted RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 FAM180AQ6UWF9 173 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 QSOX2Q6ZRP7 698 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 LMNTD1Q8N9Z9 388 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 OR7G1Q8NGA0 311 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 OR4F15Q8NGB8 312 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 OR52I1Q8NGK6 324 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 SFXN5Q8TD22 340 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 THEM6Q8WUY1 208 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 C5orf34Q96MH7 638 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 SLC22A12Q96S37 553 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 PELOQ9BRX2 385 aaKnown RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 ELL3Q9HB65 397 aaPredicted RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 ACSS1Q9NUB1 689 aaPredicted RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 ZNF226Q9NYT6 803 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 GIMD1P0DJR0 217 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 PRPH2P23942 346 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 TANGO2Q6ICL3 276 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 ZNF550Q7Z398 422 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 BCDIN3DQ7Z5W3 292 aaKnown RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 LRRC28Q86X40 367 aaPredicted RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 OR10A4Q9H209 315 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 RBFOX1Q9NWB1 397 aaKnown RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 RABL2AQ9UBK7 228 aaPredicted RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 RABL2BQ9UNT1 228 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 RBBP6Q7Z6E9 1792 aaKnown RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 A0A1B0GVI7 797 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 ZNF860A6NHJ4 632 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 OR2AT4A6NND4 320 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 FGFBP1Q14512 234 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 ARHGAP19Q14CB8 494 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 DEFB134Q4QY38 66 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 RSPO2Q6UXX9 243 aaPredicted RBP13.86□□□□□ -0.19
NUP50-201ENST00000347635 OR51J1Q9H342 316 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 LAMP5Q9UJQ1 280 aa13.86□□□□□ -0.19
NUP50-201ENST00000347635 FER1L6Q2WGJ9 1857 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 WASHC1A8K0Z3 465 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 GFYI3L273 518 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 ZNF823P16415 610 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 CERS1P27544 350 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 GARNL3Q5VVW2 1013 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 ZC3H14Q6PJT7 736 aaKnown RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 MSRB3Q8IXL7 192 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 KLHDC8BQ8IXV7 354 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 NANOGP1Q8N7R0 232 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 NEURL3Q96EH8 262 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 MS4A4EQ96PG1 132 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 ZNF559Q9BR84 538 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 SLIRPQ9GZT3 109 aaKnown RBP13.85□□□□□ -0.19
NUP50-201ENST00000347635 GRHPRQ9UBQ7 328 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 NUP205Q92621 2012 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 PCMT1P22061 227 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 ODF4Q2M2E3 257 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 PGGHGQ32M88 737 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 CCSMST1Q4G0I0 132 aa13.85□□□□□ -0.19
NUP50-201ENST00000347635 FAM71E1Q6IPT2 247 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms