RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MN1Q10571 1320 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 SEC16AO15027 2179 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 C4orf51C9J302 202 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 PLA2G10O15496 165 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 AKR7A2O43488 359 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 LDB3O75112 727 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ZNF888P0CJ79 500 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 MYOGP15173 224 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 SHC1P29353 583 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 PYCR1P32322 319 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 DDOSTP39656 456 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 VEGFBP49765 207 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 RGS1Q08116 209 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 MLF2Q15773 248 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 CST6Q15828 149 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 PGGHGQ32M88 737 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 FLYWCH1Q4VC44 716 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 RPTNQ6XPR3 784 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ACBD7Q8N6N7 88 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 MORN4Q8NDC4 146 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 TTLQ8NG68 377 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 OR2L5Q8NG80 312 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 VWCEQ96DN2 955 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 TOX2Q96NM4 488 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ALG8Q9BVK2 526 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 KRCC1Q9NPI7 259 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 ACSL5Q9ULC5 683 aa12.06□□□□□ -0.48
HMGCS1-201ENST00000325110 A0A1W2PQU0 124 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 KAT7O95251 611 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 TIMP1P01033 207 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ALAS2P22557 587 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ACTR1BP42025 376 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ACTR1AP61163 376 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 FUT5Q11128 374 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ADAM15Q13444 863 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ASAH1Q13510 395 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 NNATQ16517 81 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ACOT11Q8WXI4 607 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 SNAPC3Q92966 411 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 TRIM63Q969Q1 353 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ELP4Q96EB1 424 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 CHFRQ96EP1 664 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 CD180Q99467 661 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 OR52D1Q9H346 318 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 WASH6PQ9NQA3 447 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 PAK6Q9NQU5 681 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 HELZP42694 1942 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 NOTCH4Q99466 2003 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 TRAV27A0A087WT01 109 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 A0A1W2PPV9 198 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 FAM86C2PA6NEL3 165 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 OR2B3O76000 313 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 SLC35G6P0C7Q6 338 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 CDK5Q00535 292 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 DPTQ07507 201 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 C19orf48Q6RUI8 117 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 QSOX2Q6ZRP7 698 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 ZNF765Q7L2R6 523 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 CEACAM19Q7Z692 300 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 SRFBP1Q8NEF9 429 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 PCNPQ8WW12 178 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 LINC00615Q96LM1 132 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 MED28Q9H204 178 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 CALML5Q9NZT1 146 aa12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 MRPL15Q9P015 296 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-201ENST00000325110 A0A0A6YYD5 115 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 CACNB4O00305 520 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 CASC3O15234 703 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 EPPINO95925 133 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 TP53P04637 393 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 NAA10P41227 235 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 AGERQ15109 404 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 TMEM31Q5JXX7 168 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 FAM111BQ6SJ93 734 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 ENPP7Q6UWV6 458 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 GDF7Q7Z4P5 450 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 ZNF433Q8N7K0 673 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 TMEM99Q8N816 258 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 SPRTNQ9H040 489 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 KCNN2Q9H2S1 579 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 SRMSQ9H3Y6 488 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 APOBEC3BQ9UH17 382 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 RASD1Q9Y272 281 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 LOC105369274A0A096LPK9 316 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 IGKV1-8A0A0C4DH67 115 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 TMEM129A0AVI4 362 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 PRR23D1E9PI22 279 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 EFCAB14O75071 495 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 OR5F1O95221 314 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 RASGRP1O95267 797 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 HMGN1P05114 100 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 PRR23D2P0DMB1 279 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 POLR2CP19387 275 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 TLX1P31314 330 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 OR10A3P58181 314 aa12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-201ENST00000325110 RANBP3LQ86VV4 465 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms