RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 NXF2Q9GZY0 626 aaKnown RBP13.77□□□□□ -0.21
RPUSD2-201ENST00000315616 OR51E2Q9H255 320 aa13.77□□□□□ -0.21
RPUSD2-201ENST00000315616 EGLN3Q9H6Z9 239 aa13.77□□□□□ -0.21
RPUSD2-201ENST00000315616 SPTBP11277 2137 aa13.77□□□□□ -0.21
RPUSD2-201ENST00000315616 OR5K4A6NMS3 321 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 SOX1O00570 391 aaPredicted RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 TLX2O43763 284 aaPredicted RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 GALR3O60755 368 aaPredicted RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 ZNF10P21506 573 aaPredicted RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 SHC2P98077 582 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 ARHGAP11BQ3KRB8 267 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 PUS10Q3MIT2 529 aaKnown RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 GALNT12Q8IXK2 581 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 CSNK1A1LQ8N752 337 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 KBTBD8Q8NFY9 601 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 FGF11Q92914 225 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 SDF2Q99470 211 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 MTHFD2LQ9H903 347 aaPredicted RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 PRDM9Q9NQV7 894 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 PTGFRNQ9P2B2 879 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 CLEC2DQ9UHP7 191 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 C19orf53Q9UNZ5 99 aaPredicted RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 LAMA1P25391 3075 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 A0A1W2PPC4 97 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 CTSEP14091 401 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 ST6GAL1P15907 406 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 HHEXQ03014 270 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 C19orf57Q0VDD7 668 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 MED22Q15528 200 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 OCLNQ16625 522 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 NDUFA9Q16795 377 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 NKAIN4Q8IVV8 208 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 UBQLNLQ8IYU4 475 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 PARP16Q8N5Y8 322 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 WDR36Q8NI36 951 aaKnown RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 C9orf43Q8TAL5 461 aaPredicted RBP13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 Q96MT0 163 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 MGLLQ99685 303 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 FBXO34Q9NWN3 711 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 SLC13A4Q9UKG4 626 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 WDR45Q9Y484 360 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 PEX16Q9Y5Y5 336 aa13.76□□□□□ -0.21
RPUSD2-201ENST00000315616 OR5K3A6NET4 321 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 SGK494L7N484 410 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ATP1B1P05026 303 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 GTF2E2P29084 291 aaKnown RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 HTR3AP46098 478 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 MAP4K2Q12851 820 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 GAS6Q14393 721 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 TRAM2Q15035 370 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 DEFB110Q30KQ9 67 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 EXOSC6Q5RKV6 272 aaKnown RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 GDPD3Q7L5L3 318 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ZNF367Q7RTV3 350 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 CA13Q8N1Q1 262 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 FAM26EQ8N5C1 309 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 CELF2-AS1Q8N7Q2 184 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 CENPOQ9BU64 300 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 POLDIP3Q9BY77 421 aaKnown RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ADAP2Q9NPF8 381 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 CNIH4Q9P003 139 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ZNF443Q9Y2A4 671 aaPredicted RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 LOC110117498-PIK3R3F6TDL0 507 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 GPR75O95800 540 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 RPLP0P05388 317 aaKnown RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 CT62P0C5K7 136 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 CCNYL3P0C7X3 344 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 TRAPPC2P0DI81 140 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 TRAPPC2BP0DI82 140 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 DBTP11182 482 aaKnown RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 CKMT1AP12532 417 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ZNF91Q05481 1191 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 MGAT2Q10469 447 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 MAPK14Q16539 360 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 PRICKLE4Q2TBC4 344 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 WDR45BQ5MNZ6 344 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 MANEAQ5SRI9 462 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ZNF836Q6ZNA1 936 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 SYT13Q7L8C5 426 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ATCAYQ86WG3 371 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 DEFB119Q8N690 84 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 OR8D4Q8NGM9 314 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 ZDHHC1Q8WTX9 485 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 KLHDC7BQ96G42 594 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 FAM46AQ96IP4 442 aaKnown RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 LRRC61Q9BV99 259 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 TSSK6Q9BXA6 273 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 TPSD1Q9BZJ3 242 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 PIGUQ9H490 435 aa13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 LSM2Q9Y333 95 aaKnown RBP13.75□□□□□ -0.21
RPUSD2-201ENST00000315616 LOC100506127A0A0U1RQW1 187 aa13.74□□□□□ -0.21
RPUSD2-201ENST00000315616 FAM170BA6NMN3 283 aa13.74□□□□□ -0.21
RPUSD2-201ENST00000315616 AGR2O95994 175 aa13.74□□□□□ -0.21
RPUSD2-201ENST00000315616 OMPP47874 163 aa13.74□□□□□ -0.21
RPUSD2-201ENST00000315616 RGS8P57771 180 aaPredicted RBP13.74□□□□□ -0.21
RPUSD2-201ENST00000315616 ST3GAL3Q11203 375 aa13.74□□□□□ -0.21
RPUSD2-201ENST00000315616 EXOSC7Q15024 291 aaKnown RBP13.74□□□□□ -0.21
RPUSD2-201ENST00000315616 NCF4Q15080 339 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms