RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 NLRP8Q86W28 1048 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 MRI1Q9BV20 369 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 ADAMTS10Q9H324 1103 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 EOMESO95936 686 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 CHRNEQ04844 493 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 CDK5R2Q13319 367 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 DMRTC1Q5HYR2 192 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 OR2G6Q5TZ20 316 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 DCUN1D3Q8IWE4 304 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 VWA5B2Q8N398 1253 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 CSNK1A1LQ8N752 337 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 SLC2A12Q8TD20 617 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 NT5C3BQ969T7 300 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 SGTBQ96EQ0 304 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 OR2M4Q96R27 311 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 RDH14Q9HBH5 336 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 INSL5Q9Y5Q6 135 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 ATRNO75882 1429 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 A6NCN8 305 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 CLN5O75503 358 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 IL32P24001 234 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 SRP9P49458 86 aaKnown RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 MPP7Q5T2T1 576 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 PNCKQ6P2M8 343 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 ZNF572Q7Z3I7 529 aaPredicted RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 NOXA1Q86UR1 476 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 IL22RA1Q8N6P7 574 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 CELF2-AS1Q8N7Q2 184 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 ULBP3Q9BZM4 244 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 HAPLN2Q9GZV7 340 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 PTGES2Q9H7Z7 377 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 DNAJC15Q9Y5T4 150 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 G3V3Y1 287 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 TP53P04637 393 aaPredicted RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 CD70P32970 193 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 NDUFA6P56556 154 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 AKR1C1Q04828 323 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 FAM219BQ5XKK7 198 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 TMEM217Q8N7C4 229 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 CNOT9Q92600 299 aaKnown RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 GPR62Q9BZJ7 368 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 KATNBL1Q9H079 304 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 PORP16435 677 aaPredicted RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 NME2P22392 152 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 KDELR2P33947 212 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 RUNX2Q13950 521 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 EBPQ15125 230 aaKnown RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 ZNF585AQ6P3V2 769 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 BRAT1Q6PJG6 821 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 LYPD4Q6UWN0 246 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 APOOLQ6UXV4 268 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 COX15Q7KZN9 410 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 ZFAND4Q86XD8 727 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 FAM185AQ8N0U4 392 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 C12orf45Q8N5I9 185 aaPredicted RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 DEFB133Q30KQ1 61 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 ZNF776Q68DI1 518 aaPredicted RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 CMIPQ8IY22 773 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 SUMF2Q8NBJ7 301 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 CENPOQ9BU64 300 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 GPN2Q9H9Y4 310 aaPredicted RBP11.95□□□□□ -0.5
USP38-201ENST00000307017 SIAEQ9HAT2 523 aa11.95□□□□□ -0.5
USP38-201ENST00000307017 GGT1P19440 569 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 CARD18P57730 90 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 MLC1Q15049 377 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 RNASE10Q5GAN6 216 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 CPEB2Q7Z5Q1 589 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 B3GNT8Q7Z7M8 397 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 RPL3LQ92901 407 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 BORCS6Q96GS4 357 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 TLR9Q9NR96 1032 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 A0A0G2JLL6 359 aaPredicted RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 HSBP1L1C9JCN9 74 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 ENSAO43768 121 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 IFNA17P01571 189 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 SERPINA5P05154 406 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 HTRA3P83110 453 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 PDSS1Q5T2R2 415 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 PRRT2Q7Z6L0 340 aaPredicted RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 SUMF1Q8NBK3 374 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 ECHDC3Q96DC8 303 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 SERINC2Q96SA4 455 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 ACTL8Q9H568 366 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 AP1G1O43747 822 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 AGR2O95994 175 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 F13BP05160 661 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 ABOP16442 354 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 TGM1P22735 817 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 TM4SF1P30408 202 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 RFC2P35250 354 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 CLEC12BQ2HXU8 276 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 GPR137CQ8N3F9 429 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 ARID1BQ8NFD5 2236 aaPredicted RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 OR14A2Q96R54 314 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 PPA2Q9H2U2 334 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 MRM3Q9HC36 420 aaKnown RBP11.94□□□□□ -0.5
USP38-201ENST00000307017 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
USP38-201ENST00000307017 MST1RQ04912 1400 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms