RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 C14orf166Q9Y224 244 aaKnown RBP16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 RNF215Q9Y6U7 377 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 DDX60LQ5H9U9 1706 aaKnown RBP16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 TRBV2A0A0J9YWF9 115 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 CLIC3O95833 236 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 OSMP13725 252 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 GPX3P22352 226 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZP2Q05996 745 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 GXYLT1Q4G148 440 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR8S1Q8NH09 359 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 HSPE1-MOB4S4R3N1 261 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 MYH7BA7E2Y1 1941 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 F5P12259 2224 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 APOL3O95236 402 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 LHCGRP22888 699 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 SNX29P2Q8IUI4 249 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR5T2Q8NGG2 359 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF675Q8TD23 568 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 SPTSSAQ969W0 71 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC7A6OSQ96CW6 309 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 BARD1Q99728 777 aaKnown RBP16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 DHCR7Q9UBM7 475 aaKnown RBP16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 GPR45Q9Y5Y3 372 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 PAPPAQ13219 1627 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 TM7SF3Q9NS93 570 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 NPIPA5A0A0B4J1W7 369 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 NPIPA7E9PJI5 369 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 IGLV3-25P01717 112 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 NPIPA8P0DM63 369 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 SSR4P51571 173 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR1D5P58170 312 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 PRKCDQ05655 676 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF423Q2M1K9 1284 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 BOLLQ8N9W6 283 aaKnown RBP16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 GALNT6Q8NCL4 622 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR7D2Q96RA2 312 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 VAPAQ9P0L0 249 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 EMCNQ9ULC0 261 aa16.64■□□□□ 0.25
CDC42EP3-201ENST00000295324 PIGGQ5H8A4 983 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PAPD4Q6PIY7 484 aaKnown RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 XKR5Q6UX68 686 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PLCZ1Q86YW0 608 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 WDR20Q8TBZ3 569 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 MYO18AQ92614 2054 aaKnown RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR5K3A6NET4 321 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 TSPAN4O14817 238 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 IDUAP35475 653 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR7A5Q15622 319 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 DPH1Q9BZG8 443 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 ATP13A2Q9NQ11 1180 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PKLRP30613 574 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 NADK2Q4G0N4 442 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 NKAPLQ5M9Q1 402 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PLBD1Q6P4A8 553 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 LRRN1Q6UXK5 716 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 CNIH3Q8TBE1 160 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF578Q96N58 590 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF300Q96RE9 604 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 LYSMD1Q96S90 227 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 HDHD5Q9BXW7 423 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC22A4Q9H015 551 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 FN3KQ9H479 309 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 INTS6Q9UL03 887 aaKnown RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 TEX13DA0A0J9YY54 714 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 XPNPEP2O43895 674 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 CLPXO76031 633 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 FRKP42685 505 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 EEF1A1P68104 462 aaKnown RBP16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PYCR3Q53H96 274 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PRAMEF17Q5VTA0 474 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 WBP2NLQ6ICG8 309 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 LMNTD1Q8N9Z9 388 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 L3MBTL4Q8NA19 623 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 CLMPQ9H6B4 373 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMEM9Q9P0T7 183 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 AASSQ9UDR5 926 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PCDHGA10Q9Y5H3 936 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC35F4A4IF30 521 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 GABRB3P28472 473 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 DCTP40126 519 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 CCR2P41597 374 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 MTNR1AP48039 350 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 NEIL3Q8TAT5 605 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 WBP2Q969T9 261 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 EGLN2Q96KS0 407 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 SAMD8Q96LT4 415 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR4K3Q96R72 315 aa16.63■□□□□ 0.25
CDC42EP3-201ENST00000295324 PPP1R3DO95685 299 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 HOXB9P17482 250 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 TNFRSF1BP20333 461 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 GRPRP30550 384 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 DTWD1Q8N5C7 304 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 MS4A15Q8N5U1 240 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 CRISPLD2Q9H0B8 497 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 SHISA7A6NL88 538 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 DISC1C4P0D8 188 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 PSKH1P11801 424 aa16.62■□□□□ 0.25
CDC42EP3-201ENST00000295324 APLNRP35414 380 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms