RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 SOHLH2Q9NX45 425 aa9.4□□□□□ -0.9
HMGCR-201ENST00000287936 POLHQ9Y253 713 aa9.4□□□□□ -0.9
HMGCR-201ENST00000287936 OR6C70A6NIJ9 312 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 TRAPPC2P0DI81 140 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 TRAPPC2BP0DI82 140 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 HNRNPA2B1P22626 353 aaKnown RBP9.4□□□□□ -0.91
HMGCR-201ENST00000287936 ITGB8P26012 769 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 PTBP1P26599 531 aaKnown RBP eCLIP9.4□□□□□ -0.91
HMGCR-201ENST00000287936 NKX2-5P52952 324 aaPredicted RBP9.4□□□□□ -0.91
HMGCR-201ENST00000287936 CRYBA2P53672 197 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 MAB21L1Q13394 359 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 LRIT3Q3SXY7 679 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 MEPCEQ7L2J0 689 aaKnown RBP9.4□□□□□ -0.91
HMGCR-201ENST00000287936 MS4A15Q8N5U1 240 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 OR4F15Q8NGB8 312 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 CREB3L4Q8TEY5 395 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 TSACCQ96A04 125 aaPredicted RBP9.4□□□□□ -0.91
HMGCR-201ENST00000287936 RFT1Q96AA3 541 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 CNRIP1Q96F85 164 aaPredicted RBP9.4□□□□□ -0.91
HMGCR-201ENST00000287936 ARHGDIGQ99819 225 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 PIGUQ9H490 435 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 ENAMQ9NRM1 1142 aa9.4□□□□□ -0.91
HMGCR-201ENST00000287936 TESQ9UGI8 421 aaKnown RBP9.4□□□□□ -0.91
HMGCR-201ENST00000287936 SCN5AQ14524 2016 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 TMEM221A6NGB7 291 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 TSC22D2O75157 780 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 APBB3O95704 486 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 NR4A2P43354 598 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 CENPAP49450 140 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 PDX1P52945 283 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 KIAA1024LP59773 190 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 CDK5Q00535 292 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 PON3Q15166 354 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 PAQR6Q6TCH4 344 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SLC44A3Q8N4M1 653 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 LINC01555Q8NAE3 123 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 WDFY2Q96P53 400 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SIGLEC11Q96RL6 698 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 GFM1Q96RP9 751 aaKnown RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 WACQ9BTA9 647 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ZNF222Q9UK12 451 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 INMT-MINDY4F8WBC2 141 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 GABRPO00591 440 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 PTNP21246 168 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 GRK6P43250 576 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 IFITM3Q01628 133 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 CAMK1Q14012 370 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 LTB4RQ15722 352 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ZCCHC12Q6PEW1 402 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ZNF793Q6ZN11 406 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SPATC1Q76KD6 591 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 AVL9Q8NBF6 648 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 KCT2Q8NC54 265 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 DHRS1Q96LJ7 313 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 DGAT2Q96PD7 388 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 DPAGT1Q9H3H5 408 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SLC6A20Q9NP91 592 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 PRDM7Q9NQW5 492 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SLC17A4Q9Y2C5 497 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 PLEKHM1Q9Y4G2 1056 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ZNF879B4DU55 563 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 NRG2O14511 850 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 POLR1CO15160 346 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 LYRM1O43325 122 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 GSTT2P0CG29 244 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 GSTT2BP0CG30 244 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 TRIM23P36406 574 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 FRKP42685 505 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SRP54P61011 504 aaKnown RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 HTRA3P83110 453 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SHC2P98077 582 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 NUMA1Q14980 2115 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SF3A2Q15428 464 aaKnown RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ZIC1Q15915 447 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ZNF770Q6IQ21 691 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 FIGNL1Q6PIW4 674 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 QSOX2Q6ZRP7 698 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 TSEN54Q7Z6J9 526 aaKnown RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SYT14Q8NB59 555 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 FN3KQ9H479 309 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 BABAM2Q9NXR7 383 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 IL20RAQ9UHF4 553 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ACAD8Q9UKU7 415 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 A8MV72 311 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 TRIM3O75382 744 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 PPM1BO75688 479 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 CEACAM5P06731 702 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ENDOUP21128 410 aaKnown RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 AK4P27144 223 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 GPR143P51810 404 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 AP3S2P59780 193 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ASAH1Q13510 395 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 ENPP2Q13822 863 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SLC25A30Q5SVS4 291 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 WDR53Q7Z5U6 358 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 CEACAM19Q7Z692 300 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 SAMD12Q8N8I0 201 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 OR51A7Q8NH64 312 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 G6PC3Q9BUM1 346 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms