RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 A0A1W2PR48 441 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 LANCL1O43813 399 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 CISD3P0C7P0 127 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 ADH5P11766 374 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 POU3F3P20264 500 aaPredicted RBP9.4□□□□□ -0.9
LIG3-201ENST00000262327 CERS1P27544 350 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 EVI2BP34910 448 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 AHRP35869 848 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 NUDT1P36639 197 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 RPS5P46782 204 aaKnown RBP9.4□□□□□ -0.9
LIG3-201ENST00000262327 RGS19P49795 217 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
LIG3-201ENST00000262327 SLC16A1P53985 500 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 PDGFRLQ15198 375 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 BTBD16Q32M84 506 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 LRRTM4Q86VH4 590 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 OR4M2Q8NGB6 313 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 TMEM255BQ8WV15 326 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 TTC9Q92623 222 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 FGF11Q92914 225 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 SNAPC3Q92966 411 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 RIPOR3Q96MK2 946 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
LIG3-201ENST00000262327 ZFR2Q9UPR6 939 aaKnown RBP9.4□□□□□ -0.9
LIG3-201ENST00000262327 GTPBP1O00178 669 aaKnown RBP9.4□□□□□ -0.9
LIG3-201ENST00000262327 SHOXO15266 292 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 LYRM1O43325 122 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 PCDH8O95206 1070 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 NFATC1O95644 943 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 PAHP00439 452 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 PRNPP04156 253 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 ALAS2P22557 587 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 TAS2R38P59533 333 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 EFNB1P98172 346 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 RAB40BQ12829 278 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 COX10Q12887 443 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 TPBGQ13641 420 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 YIF1BQ5BJH7 314 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 NR2C2APQ86WQ0 139 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 OR4N5Q8IXE1 308 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 OR5K2Q8NHB8 316 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 GRPEL2Q8TAA5 225 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 WFIKKN2Q8TEU8 576 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 RHBGQ9H310 441 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 EPHX3Q9H6B9 360 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 PPP1R3EQ9H7J1 279 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 TRIM45Q9H8W5 580 aaPredicted RBP9.4□□□□□ -0.9
LIG3-201ENST00000262327 SCPEP1Q9HB40 452 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 CLEC1BQ9P126 229 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 CHST2Q9Y4C5 530 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 HSPB11Q9Y547 144 aa9.4□□□□□ -0.9
LIG3-201ENST00000262327 GON4LQ3T8J9 2241 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 A0A1W2PPK0 400 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 LRIT2A6NDA9 550 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 MRPL3P09001 348 aaKnown RBP9.4□□□□□ -0.91
LIG3-201ENST00000262327 ACADMP11310 421 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 TBXA2RP21731 343 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 NTSP30990 170 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 GABRA5P31644 462 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 BCL6P41182 706 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 IL12RB1P42701 662 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 SOX9P48436 509 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 AGFG1P52594 562 aaKnown RBP9.4□□□□□ -0.91
LIG3-201ENST00000262327 ZNF155Q12901 538 aaPredicted RBP9.4□□□□□ -0.91
LIG3-201ENST00000262327 MTFR2Q6P444 385 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 LURAP1LQ8IV03 231 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 CPOQ8IVL8 374 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 TIGD4Q8IY51 512 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 SIRT6Q8N6T7 355 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 FAM181AQ8N9Y4 354 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 BBS10Q8TAM1 723 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 SUN3Q8TAQ9 357 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 CXorf40AQ8TE69 158 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 SAMD8Q96LT4 415 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 SLC38A2Q96QD8 506 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 C1QTNF7Q9BXJ2 289 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 RNF32Q9H0A6 362 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 ENKD1Q9H0I2 346 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 PPIL3Q9H2H8 161 aaKnown RBP9.4□□□□□ -0.91
LIG3-201ENST00000262327 WASH6PQ9NQA3 447 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 MBNL1Q9NR56 388 aaKnown RBP9.4□□□□□ -0.91
LIG3-201ENST00000262327 PTGFRNQ9P2B2 879 aa9.4□□□□□ -0.91
LIG3-201ENST00000262327 SIRT4Q9Y6E7 314 aaPredicted RBP9.4□□□□□ -0.91
LIG3-201ENST00000262327 EYSQ5T1H1 3165 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 CENPVL1A0A0U1RR11 272 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 CDC42EP2O14613 210 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 REM1O75628 298 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
LIG3-201ENST00000262327 ALPPP05187 535 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 SLC35G4P0C7Q5 338 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 ELK1P19419 428 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 FCARP24071 287 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 KHKP50053 298 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 REEP5Q00765 189 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 FAPQ12884 760 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 KRT33BQ14525 404 aa9.39□□□□□ -0.91
LIG3-201ENST00000262327 MINDY4Q4G0A6 757 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms