RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 NUFIP1Q9UHK0 495 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CLCA3PQ9Y6N3 262 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 A3GALT2U3KPV4 340 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 DOCK8Q8NF50 2099 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PRSS38A1L453 326 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CACNB4O00305 520 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 KRT8P05787 483 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CSF3P09919 207 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 ACP2P11117 423 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TBXA2RP21731 343 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 HTR3AP46098 478 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 HCCSP53701 268 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 ADPRHP54922 357 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TMEM35AQ53FP2 167 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 AGAP6Q5VW22 663 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 CDC73Q6P1J9 531 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SLC36A4Q6YBV0 504 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 ZNF517Q6ZMY9 492 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 FRRS1Q6ZNA5 592 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 ZAR1Q86SH2 424 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 TRIM69Q86WT6 500 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 OR51L1Q8NGJ5 315 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 PIGXQ8TBF5 258 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 GNPDA2Q8TDQ7 276 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 FGF11Q92914 225 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 AGAP4Q96P64 663 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 C1QTNF2Q9BXJ5 285 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 NT5DC2Q9H857 520 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 BCL2L10Q9HD36 194 aa8.54□□□□□ -1.04
SYDE2-201ENST00000234668 USP36Q9P275 1121 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 YBX2Q9Y2T7 364 aaKnown RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 SIRT4Q9Y6E7 314 aaPredicted RBP8.54□□□□□ -1.04
SYDE2-201ENST00000234668 A0A075B6Q4 140 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 OR6C74A6NCV1 312 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 CDC123O75794 336 aaPredicted RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 CPEP16870 476 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SLC1A3P43003 542 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 CTBP2P56545 445 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 RPS7P62081 194 aaKnown RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 CD83Q01151 205 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 ST3GAL3Q11203 375 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 NNATQ16517 81 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 DEFB110Q30KQ9 67 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 ATAD3CQ5T2N8 411 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 BHLHB9Q6PI77 547 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SIRT6Q8N6T7 355 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 OR56A1Q8NGH5 318 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SLC35B4Q969S0 331 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SLC38A2Q96QD8 506 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 TCEAL2Q9H3H9 227 aaPredicted RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 NDRG2Q9UN36 371 aaKnown RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SLC17A4Q9Y2C5 497 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SF3B6Q9Y3B4 125 aaKnown RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 C2orf16Q68DN1 1984 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SLC30A4O14863 429 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 ACADMP11310 421 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 NT5EP21589 574 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 MAGEA8P43361 318 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 GCGRP47871 477 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 TSPAN31Q12999 210 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 MLC1Q15049 377 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 TBRG1Q3YBR2 411 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 KLHL22Q53GT1 634 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 RNASE12Q5GAN4 147 aaKnown RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 ZNF776Q68DI1 518 aaPredicted RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 KIAA1324Q6UXG2 1013 aaKnown RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 RPTNQ6XPR3 784 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 ZNF836Q6ZNA1 936 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SYT9Q86SS6 491 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 NRROSQ86YC3 692 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 NATD1Q8N6N6 113 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 UFD1Q92890 307 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 ZNF486Q96H40 463 aaPredicted RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 SENP5Q96HI0 755 aaPredicted RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 ACTRT3Q9BYD9 372 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 PPIL3Q9H2H8 161 aaKnown RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 MAT2BQ9NZL9 334 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 H2AFY2Q9P0M6 372 aaPredicted RBP8.53□□□□□ -1.04
SYDE2-201ENST00000234668 KCNE5Q9UJ90 142 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 LIPT1Q9Y234 373 aa8.53□□□□□ -1.04
SYDE2-201ENST00000234668 TRAV27A0A087WT01 109 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 GXYLT2A0PJZ3 443 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 MEIOCA2RUB1 952 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 E9PI62 339 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 CELA2BP08218 269 aaPredicted RBP8.52□□□□□ -1.05
SYDE2-201ENST00000234668 TYRP1P17643 537 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 MAKP20794 623 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 LSSP48449 732 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 ERVK-21P61565 698 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 ZNF155Q12901 538 aaPredicted RBP8.52□□□□□ -1.05
SYDE2-201ENST00000234668 PLK5Q496M5 336 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 MFSD12Q6NUT3 480 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 ASPGQ86U10 573 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 UBQLNLQ8IYU4 475 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 MFSD9Q8NBP5 474 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 TTLQ8NG68 377 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 OR6F1Q8NGZ6 308 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 CHAC2Q8WUX2 184 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 DNAJA3Q96EY1 480 aa8.52□□□□□ -1.05
SYDE2-201ENST00000234668 C10orf90Q96M02 699 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms