RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ACSL5Q9ULC5 683 aa16.14■□□□□ 0.17
USB1-201ENST00000219281 C2orf16Q68DN1 1984 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 HEATR5BQ9P2D3 2071 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 C1QTNF3-AMACRE9PGA6 284 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 PCDH8O95206 1070 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 PTBP1P26599 531 aaKnown RBP eCLIP16.13■□□□□ 0.179e-16■■■■■ 106.3
USB1-201ENST00000219281 PBX2P40425 430 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 GZMKP49863 264 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 PDX1P52945 283 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 CSTF1Q05048 431 aaKnown RBP16.13■□□□□ 0.17
USB1-201ENST00000219281 KRT33BQ14525 404 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 TIGD3Q6B0B8 471 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 ZNF620Q6ZNG0 422 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 CPOQ8IVL8 374 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 CADM2Q8N3J6 435 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 OR51G2Q8NGK0 314 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 ART5Q96L15 291 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 SAMD8Q96LT4 415 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 FCRL4Q96PJ5 515 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 GFM1Q96RP9 751 aaKnown RBP16.13■□□□□ 0.17
USB1-201ENST00000219281 KCNJ15Q99712 375 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 WACQ9BTA9 647 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 ANKRD19PQ9H560 264 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 HINT3Q9NQE9 182 aaKnown RBP16.13■□□□□ 0.17
USB1-201ENST00000219281 ASB6Q9NWX5 421 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 KLHL28Q9NXS3 571 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 PTGFRNQ9P2B2 879 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 POLHQ9Y253 713 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 KCNK6Q9Y257 313 aa16.13■□□□□ 0.17
USB1-201ENST00000219281 NOTOA8MTQ0 251 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 SMLR1H3BR10 107 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 ELK1P19419 428 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 FZD5Q13467 585 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 CCDC85BQ15834 202 aaPredicted RBP16.12■□□□□ 0.17
USB1-201ENST00000219281 TMEM44Q2T9K0 475 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 IDNKQ5T6J7 187 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 LIX1LQ8IVB5 337 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 OR2L5Q8NG80 312 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 C17orf50Q8WW18 174 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 ZFPM2Q8WW38 1151 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 SUSD6Q92537 303 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 TRIM63Q969Q1 353 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 SLC35A4Q96G79 324 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 GON7Q9BXV9 100 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 HDAC8Q9BY41 377 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 C6orf106Q9H6K1 298 aaPredicted RBP16.12■□□□□ 0.17
USB1-201ENST00000219281 SYNPO2LQ9H987 977 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 CALML5Q9NZT1 146 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 ADAM30Q9UKF2 790 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 PLEKHM1Q9Y4G2 1056 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 CDC42EP2O14613 210 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 KLF4O43474 513 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 HRO43593 1189 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 SLC19A2O60779 497 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 TRIM3O75382 744 aaPredicted RBP16.12■□□□□ 0.17
USB1-201ENST00000219281 GAAP10253 952 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 PRKAR1BP31321 381 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 RAB25P57735 213 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 ADAM15Q13444 863 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 RIN1Q13671 783 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 MBOAT2Q6ZWT7 520 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 TRILQ7L0X0 811 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 GET4Q7L5D6 327 aaPredicted RBP16.12■□□□□ 0.17
USB1-201ENST00000219281 FBXL6Q8N531 539 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 DTX3Q8N9I9 347 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 OR2T33Q8NG76 320 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 NACC2Q96BF6 587 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 MARVELD1Q9BSK0 173 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 GALNT9Q9HCQ5 603 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 PRSS16Q9NQE7 514 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 MED17Q9NVC6 651 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 MCUBQ9NWR8 336 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 EXTL2Q9UBQ6 330 aa16.12■□□□□ 0.17
USB1-201ENST00000219281 SPTBN5Q9NRC6 3674 aaKnown RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ZC3H12DA2A288 527 aaKnown RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 TBC1D3BA6NDS4 549 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 OR52A4PA6NMU1 304 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 SGK494L7N484 410 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 RNF13O43567 381 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ORC5O43913 435 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ZNF780AO75290 641 aaPredicted RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 C1QBP02746 253 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ARSBP15848 533 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 PKLRP30613 574 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 AHRP35869 848 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 GNG2P59768 71 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 CLPPQ16740 277 aaPredicted RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 CXXC5Q7LFL8 322 aaKnown RBP16.11■□□□□ 0.17
USB1-201ENST00000219281 NR2C2APQ86WQ0 139 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 OR7G1Q8NGA0 311 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 OR2L8Q8NGY9 312 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 RAB7BQ96AH8 199 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 GIMAP5Q96F15 307 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 TBX5Q99593 518 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ACTRT3Q9BYD9 372 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 HDHD2Q9H0R4 259 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 SFXN1Q9H9B4 322 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 ING3Q9NXR8 418 aa16.11■□□□□ 0.17
USB1-201ENST00000219281 APOBEC3BQ9UH17 382 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms