RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HHATLQ9HCP6 504 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 FBXO34Q9NWN3 711 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 MAT2BQ9NZL9 334 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 POMT2Q9UKY4 750 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 RDH16O75452 317 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 STX11O75558 287 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 UBXN7O94888 489 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 SOX3P41225 446 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 EIPR1Q53HC9 387 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 EXOSC6Q5RKV6 272 aaKnown RBP20.04■□□□□ 0.8
CLN6-224ENST00000638076 NRMQ8IXM6 262 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 ZNF619Q8N2I2 560 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 NANOGP1Q8N7R0 232 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 COX18Q8N8Q8 333 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 TMEM163Q8TC26 289 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 DACH2Q96NX9 599 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 LRRC61Q9BV99 259 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 TPSD1Q9BZJ3 242 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 C6orf62Q9GZU0 229 aaPredicted RBP20.04■□□□□ 0.8
CLN6-224ENST00000638076 DUSP22Q9NRW4 184 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 GPR52Q9Y2T5 361 aa20.04■□□□□ 0.8
CLN6-224ENST00000638076 KIAA0513O60268 411 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 THBS1P07996 1170 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 CHRNB1P11230 501 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 CDH3P22223 829 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 IFITM3Q01628 133 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 MGAT2Q10469 447 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 RNLSQ5VYX0 342 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 SYT13Q7L8C5 426 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 MRGPREQ86SM8 312 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 RBM12BQ8IXT5 1001 aaKnown RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 OR52I1Q8NGK6 324 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 GPR151Q8TDV0 419 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 ANKRD9Q96BM1 317 aaPredicted RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 CDADC1Q9BWV3 514 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 TESQ9UGI8 421 aaKnown RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 SLC7A7Q9UM01 511 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 PIP5K1CO60331 668 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 CBFA2T3O75081 653 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 RANBP1P43487 201 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 GPR4P46093 362 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 ZNF136P52737 540 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 RAB38P57729 211 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 PERM1Q5SV97 790 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 DRAXINQ8NBI3 349 aaPredicted RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 PROKR2Q8NFJ6 384 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 OR9A4Q8NGU2 314 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 SNRNP27Q8WVK2 155 aaKnown RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 CCDC59Q9P031 241 aaKnown RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 DIMT1Q9UNQ2 313 aaKnown RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 SATB2Q9UPW6 733 aa20.03■□□□□ 0.8
CLN6-224ENST00000638076 TDRD6O60522 2096 aaKnown RBP20.03■□□□□ 0.8
CLN6-224ENST00000638076 NPIPA5A0A0B4J1W7 369 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 NPIPA7E9PJI5 369 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 PEX12O00623 359 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 MYL12BO14950 172 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 RAB36O95755 333 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 HBQ1P09105 142 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 NPIPA8P0DM63 369 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 GNSP15586 552 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 PTNP21246 168 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 FPR3P25089 353 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 SLC36A4Q6YBV0 504 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 MBOAT2Q6ZWT7 520 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 GALNT12Q8IXK2 581 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 STACQ99469 402 aa20.02■□□□□ 0.8
CLN6-224ENST00000638076 POLR2J2Q9GZM3 115 aaKnown RBP20.02■□□□□ 0.8
CLN6-224ENST00000638076 NXF2Q9GZY0 626 aaKnown RBP20.02■□□□□ 0.8
CLN6-224ENST00000638076 GPX5O75715 221 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 RPS4Y1P22090 263 aaKnown RBP20.02■□□□□ 0.79
CLN6-224ENST00000638076 RNF144AP50876 292 aaPredicted RBP20.02■□□□□ 0.79
CLN6-224ENST00000638076 MAZP56270 477 aaKnown RBP20.02■□□□□ 0.79
CLN6-224ENST00000638076 FIGNL1Q6PIW4 674 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 LSRQ86X29 649 aaPredicted RBP20.02■□□□□ 0.79
CLN6-224ENST00000638076 CYP4Z2PQ8N1L4 340 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 C19orf47Q8N9M1 422 aaKnown RBP20.02■□□□□ 0.79
CLN6-224ENST00000638076 AVL9Q8NBF6 648 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 TSTD1Q8NFU3 115 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 SLC38A2Q96QD8 506 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 RACGAP1Q9H0H5 632 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 DAPK2Q9UIK4 370 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 KCNE5Q9UJ90 142 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 A3GALT2U3KPV4 340 aa20.02■□□□□ 0.79
CLN6-224ENST00000638076 PRODHO43272 600 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 DBIP07108 87 aaKnown RBP20.01■□□□□ 0.79
CLN6-224ENST00000638076 GKN3PP0CG01 181 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 PRG2P13727 222 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 STAT5AP42229 794 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 MRPL2Q5T653 305 aaKnown RBP20.01■□□□□ 0.79
CLN6-224ENST00000638076 SLC30A6Q6NXT4 461 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 ZCCHC12Q6PEW1 402 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 RANBP3LQ86VV4 465 aaPredicted RBP20.01■□□□□ 0.79
CLN6-224ENST00000638076 CTHRC1Q96CG8 243 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 MBTPS2O43462 519 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 SRFP11831 508 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 NID1P14543 1247 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 GABRA3P34903 492 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 NUDT1P36639 197 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 C1DQ13901 141 aaKnown RBP20.01■□□□□ 0.79
CLN6-224ENST00000638076 DGAT2L6Q6ZPD8 337 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms