RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PM20D2Q8IYS1 436 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 OR52N2Q8NGI0 321 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 FAM110BQ8TC76 370 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 ITCHQ96J02 903 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 SLC35G5Q96KT7 338 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 DEFB127Q9H1M4 99 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 UBQLN3Q9H347 655 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 CCDC134Q9H6E4 229 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 POLE3Q9NRF9 147 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 GPATCH2Q9NW75 528 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 THUMPD1Q9NXG2 353 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 PPP4R1LQ9P1A2 415 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 SPENQ96T58 3664 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 FLNCQ14315 2725 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
SNRPA1-216ENST00000626000 NINQ8N4C6 2090 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 ALG1L2C9J202 215 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 E9PLN8 166 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 H3BNH8 94 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 SCDO00767 359 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 RFXANKO14593 260 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 LRRTM2O43300 516 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 WDR1O75083 606 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 TRAPPC6AO75865 159 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 KCNK2O95069 426 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 UTS2O95399 124 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 ACTL6AO96019 429 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 ZCCHC18P0CG32 403 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 EFNA1P20827 205 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 AGAP20933 346 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 TBXA2RP21731 343 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 MSX1P28360 303 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 PTPN6P29350 595 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 SRD5A2P31213 254 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 RFX3P48380 749 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 TRPC1P48995 793 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 KHKP50053 298 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 SMSP52788 366 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 SQLEQ14534 574 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 TOMM20Q15388 145 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 TMEM211Q6ICI0 200 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 AAGABQ6PD74 315 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 C6orf120Q7Z4R8 191 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 MTERF4Q7Z6M4 381 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 CLECL1Q8IZS7 167 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 OR4K17Q8NGC6 315 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 OR4N2Q8NGD1 307 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 NEIL3Q8TAT5 605 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 NEURL3Q96EH8 262 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 VKORC1Q9BQB6 163 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 SLC35A5Q9BS91 424 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 RAD21L1Q9H4I0 556 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 LIPT1Q9Y234 373 aa12.79□□□□□ -0.36
SNRPA1-216ENST00000626000 WIPF3A6NGB9 483 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 CCDC154A6NI56 674 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 CCL21O00585 134 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 FADS1O60427 444 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 ANP32DO95626 131 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 CPSF4O95639 269 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 TPOP07202 933 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 MATN1P21941 496 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 PTGDSP41222 190 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 NME5P56597 212 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 HPCAP84074 193 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 GTF3C1Q12789 2109 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 RCAN2Q14206 197 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 NHSL2Q5HYW2 709 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 DCST2Q5T1A1 773 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 FNDC7Q5VTL7 733 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 C1QL3Q5VWW1 255 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 SAXO2Q658L1 398 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 BICRALQ6AI39 1079 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 ENPP6Q6UWR7 440 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 C16orf62Q7Z3J2 963 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 WDR53Q7Z5U6 358 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 ANKRD46Q86W74 232 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 PIK3R3Q92569 461 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 PMM1Q92871 262 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 CDS1Q92903 461 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 TEX37Q96LM6 180 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 GNRHR2Q96P88 292 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 OR7D2Q96RA2 312 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 OR2B2Q9GZK3 357 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 STOML1Q9UBI4 398 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 ERRFI1Q9UJM3 462 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
SNRPA1-216ENST00000626000 IGLV3-32A0A0A0MS00 114 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 GXYLT2A0PJZ3 443 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 DYNC1I1O14576 645 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 GNB5O14775 395 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 NDUFB5O43674 189 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 SCO2O43819 266 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 NME6O75414 186 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 STX11O75558 287 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 LDLRP01130 860 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 RFPL3SP0C7P2 107 aa12.77□□□□□ -0.37
SNRPA1-216ENST00000626000 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms