RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 GDF7Q7Z4P5 450 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF438Q7Z4V0 828 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 HMGN2P46Q86SG4 172 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 C17orf82Q86X59 251 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 SFTPA2Q8IWL1 248 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF595Q8IYB9 648 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 VWA5B2Q8N398 1253 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 OR5T3Q8NGG3 340 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 OR6Q1Q8NGQ2 317 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 TMEM163Q8TC26 289 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 GPR151Q8TDV0 419 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 SLC35B4Q969S0 331 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF285Q96NJ3 590 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 TSSK6Q9BXA6 273 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 SLIRPQ9GZT3 109 aaKnown RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 RAB33BQ9H082 229 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 FAM60AQ9NP50 221 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 AKIP1Q9NQ31 210 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 C14orf105Q9NVL8 296 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 IL20Q9NYY1 176 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 DNAJC27Q9NZQ0 273 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 EPHA6Q9UF33 1036 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 DIMT1Q9UNQ2 313 aaKnown RBP11.13□□□□□ -0.63
USP6NL-206ENST00000609853 PCDHGA3Q9Y5H0 932 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 CACNA1IQ9P0X4 2223 aa11.13□□□□□ -0.63
USP6NL-206ENST00000609853 TRAPPC13A5PLN9 417 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 SLC9B1P1A6NJY1 282 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CLDN4O14493 209 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PRODHO43272 600 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PRKYO43930 277 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 OR10H2O60403 315 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CTNSO60931 367 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 RDH16O75452 317 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 NSA2O95478 260 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 SCG5P05408 212 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 GADD45AP24522 165 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TRHRP34981 398 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 OPRL1P41146 370 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 LIMK1P53667 647 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 MLLT10P55197 1068 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 HNRNPKP61978 463 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PPP1CAP62136 330 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 IGLV3-21P80748 117 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ID2Q02363 134 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 RAB40BQ12829 278 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 MED22Q15528 200 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 GPR68Q15743 365 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 SYT14P1Q58G82 188 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TCTE1Q5JU00 501 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 SLC36A4Q6YBV0 504 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 Q6ZNX1 250 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PRICKLE2Q7Z3G6 844 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 WDR53Q7Z5U6 358 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF761Q86XN6 746 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TMEFF1Q8IYR6 380 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 FRMD1Q8N878 549 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TMEM52Q8NDY8 209 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 OR6C4Q8NGE1 309 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 RLN3Q8WXF3 142 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 FGF11Q92914 225 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 RFKQ969G6 155 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PPP1R14BQ96C90 147 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 LRR1Q96L50 414 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 SLC38A3Q99624 504 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 GPA33Q99795 319 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 LMF2Q9BU23 707 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PRO3102Q9H379 93 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 SIAEQ9HAT2 523 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TMEM74BQ9NUR3 256 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TBCCD1Q9NVR7 557 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CCDC59Q9P031 241 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TESQ9UGI8 421 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PLCL2Q9UPR0 1127 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CDHR4A6H8M9 788 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 KLF4O43474 513 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 FRS3O43559 492 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 BRINP1O60477 761 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 RAB36O95755 333 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 WNT1P04628 370 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 HMGN1P05114 100 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ENDOUP21128 410 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF136P52737 540 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 EPHA4P54764 986 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 MAZP56270 477 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 FZD5Q13467 585 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 GAS6Q14393 721 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 SPHARQ15513 63 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF404Q494X3 552 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 C3orf38Q5JPI3 329 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ACSM5Q6NUN0 579 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TUBA3EQ6PEY2 450 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 KIF18BQ86Y91 864 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 GALNT12Q8IXK2 581 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CARFQ8N187 725 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TMCO5AQ8N6Q1 288 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 NANOGP1Q8N7R0 232 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 C7orf57Q8NEG2 295 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 OR9Q1Q8NGQ5 310 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 OR9A4Q8NGU2 314 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms