RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TREM2Q9NZC2 230 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PIPOXQ9P0Z9 390 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 MYEF2Q9P2K5 600 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 GALPQ9UBC7 116 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF222Q9UK12 451 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 SPATA2Q9UM82 520 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 DUSP12Q9UNI6 340 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CARHSP1Q9Y2V2 147 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PCDHGA9Q9Y5G4 932 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 DMRT1Q9Y5R6 373 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTGDR2Q9Y5Y4 395 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 NUP214P35658 2090 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 COL4A4P53420 1690 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 A0A1B0GUH1 482 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 FAM74A7A6NL05 159 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ANXA2P2A6NMY6 339 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 RHPN2P1A8MT19 583 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 AGAP14A8MT82 685 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 LACTBL1A8MY62 500 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ISM1B1AKI9 464 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 I6L893 689 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 J3KR12 359 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 L7N2F9 121 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 GTPBP1O00178 669 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 IMPA2O14732 288 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SCAMP1O15126 338 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 TGM5O43548 720 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SGCEO43556 437 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 LCMT2O60294 686 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 RAMP2O60895 175 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 RDH16O75452 317 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ECI2O75521 394 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 IL18BPO95998 194 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SOD1P00441 154 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 OTCP00480 354 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ADRA2AP08913 450 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SAGP10523 405 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CXCL2P19875 107 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 PAICSP22234 425 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTAFRP25105 342 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 RBMS1P29558 406 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 HOXC13P31276 330 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 GKP32189 559 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 S100A3P33764 101 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ATP5C1P36542 298 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 GPX4P36969 197 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CEACAM6P40199 344 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 NNMTP40261 264 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 PBX3P40426 434 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CAPZA2P47755 286 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 MTNR1BP49286 362 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CSNK1EP49674 416 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CXCR3P49682 368 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 HNMTP50135 292 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 MMP15P51511 669 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ATXN1P54253 815 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 GAS1P54826 345 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ARPP19P56211 112 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SPCS3P61009 180 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 WDR5P61964 334 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CXADRP78310 365 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 PITPNAQ00169 270 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 DSC2Q02487 901 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 YWHAHQ04917 246 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 RBBP4Q09028 425 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 C2orf80Q0P641 193 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 LRRC74AQ0VAA2 488 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 KRT33BQ14525 404 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 DMC1Q14565 340 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTGES3Q15185 160 aaKnown RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 P2RY14Q15391 338 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SEC23BQ15437 767 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 MPPED2Q15777 294 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CHRNA6Q15825 494 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 NTRK2Q16620 822 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ST3GAL2Q16842 350 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC10A6Q3KNW5 377 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 UAP1L1Q3KQV9 507 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 FAM74A3Q4VXF1 159 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 RFTN2Q52LD8 501 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ELFN2Q5R3F8 820 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 AVPI1Q5T686 147 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 FAM69AQ5T7M9 428 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 AFMIDQ63HM1 303 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF425Q6IV72 752 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 MRNIPQ6NTE8 343 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 LBX2Q6XYB7 198 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTCHD4Q6ZW05 846 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 MOB2Q70IA6 237 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CHMP1BQ7LBR1 199 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF551Q7Z340 670 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 MRGPRGQ86SM5 289 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 TPRA1Q86W33 373 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 PTOV1Q86YD1 416 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 STK40Q8N2I9 435 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SVBPQ8N300 66 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC43A2Q8N370 569 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 CPXM2Q8N436 756 aa3.81□□□□□ -1.8
HMGB1P50-201ENST00000605814 FTMTQ8N4E7 242 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms